Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3224 |
Symbol | |
ID | 5663613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3952171 |
End bp | 3953280 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641237883 |
Product | putative outer membrane adhesin like proteiin |
Protein accession | YP_001503075 |
Protein GI | 157963041 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01965] VCBS repeat [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAG TCAATAATCG TTTATCTATT CAGTACGATG AGCAGTTTTG GTTAATCGAC GTTACACATC CTAGCTCTCC AGAGGTGATT GGCAATAAAG AAGTACCAGC ATTAAGCCAC TCTAAAGATG TAAAAGTGTT AGGCGATACC TTAATCGCTG CGCGAGATGG TCAGCTTAAG AAGTATCAGA TAAATATTGC ACCAGTCATT ACGGCTTCTC TCTTAACAGT CAATGAAGAT GAAACGCTAA TACAGGAGCT CCCAGTAAGT ACTTGGCACG CAGGCGTATT AACTTTTGAA ATATTGACGC AGGCTTCGAA GGGGACTGTT ACTGTTGACC ACGAAGGCGT TGTAAATTTC TCCCCTAACA AAGATGAGTT CGGTGAAGAT CAATTTACTG TTAGAGTGGC TGACAATCAT GGAAGGAGCT CTGAAAAAGA GATTCGGATT GATATCCTTC CAATTAACGA CGCACCTAGA GTATTAGATC AGACATTTGT TACGAATGAG GATGTTGAAC TCCGTAGCAG TTTAATAGTT GCAGAAGTTG ATAGCGATGA ACTCCAATTC GTGTTGGTTA CAGATACGCT AAACGGGGTG GTCACGCTTA GTGAGTCAGG TGAATATTCT TATCAAGCGA CAGCTAATTT TAATGGTACA GATAGTTTTA CTTTTAGTGT GACTGATGGC GTTAATGCTG CCGTTGAAGC GAGTGTTACC ATAAACATTT TAGCGGTTAA TGATGCGCCT GTTGCAAGTC ATCAGTCGTT AAACATCGGA TACAATCGTG AGGTCGCGAG TCGATTATCA GCTTTCGATG TTGATGAAGA TGAATTGATG TTTGAAGTCG TTACCAATGT TAGTCATGGG GAATTAGCCT TAAATGATGA TGGTAGCTTT ATCTATAACC CAAAAACTGA TTTTAGCGGT AATGACAGCT TTACCTATCG GGTAACTGAT ACCGCAGGAA GCACAAGTGA AGCCGTTGTT AGTATAACAG TTAGTGCAAA ACCGAAAGAG TCGACCTCAG ATTCATCGGG GGGCTCTCTT GGGTACTTGT GCTTACTCTA TTTGATGCTT ACGGTTGGAT ATCGCCAAAG ATTTCGATAG
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Protein sequence | MDLVNNRLSI QYDEQFWLID VTHPSSPEVI GNKEVPALSH SKDVKVLGDT LIAARDGQLK KYQINIAPVI TASLLTVNED ETLIQELPVS TWHAGVLTFE ILTQASKGTV TVDHEGVVNF SPNKDEFGED QFTVRVADNH GRSSEKEIRI DILPINDAPR VLDQTFVTNE DVELRSSLIV AEVDSDELQF VLVTDTLNGV VTLSESGEYS YQATANFNGT DSFTFSVTDG VNAAVEASVT INILAVNDAP VASHQSLNIG YNREVASRLS AFDVDEDELM FEVVTNVSHG ELALNDDGSF IYNPKTDFSG NDSFTYRVTD TAGSTSEAVV SITVSAKPKE STSDSSGGSL GYLCLLYLML TVGYRQRFR
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