Gene Spea_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3222 
Symbol 
ID5663611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3949982 
End bp3950770 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content42% 
IMG OID641237881 
Producthypothetical protein 
Protein accessionYP_001503073 
Protein GI157963039 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCTAA TTCAACACCA TGCCTCTACT TCAGAAACCT TATATGAGCC ATTCTCAGTT 
AAGCACCACA TAACACTCCC CTTATTAGTA TTTCTGTTGG TTGCGTCATT ATTCGAATAT
TTTCAATTTG ATCTCGACAT TGCTCAATAC ATTTTTGACT GGCAAGGGGG GCTGACTTAC
TGGCCGTTAA AAACACAATG GTTTACCAGT ACCATAATGC ATACTGGCGG GCGAGATCTC
GTCATATTAC TGGGTGTACT TTTATTTACC GCTTTGGGAT TGAGTTTTAA AATTCAATAC
CTTAACCAAT ATAGCCGTAA CTTATTTTGC CTAGCCATGA GTGTTGTCAG CAGTATTTTA
ATCGTTAAAT TTGCCAAAGA CTTCACTCAT GTCAATTGTC CTTGGGACTT GACGCGATTT
GGTGGTCATG TCGCTTACAC AGCCATTTTT AGCCCACTAC CTGCAGGCAC AGAACTTGGT
CGATGCTTTC CAGGGGGGCA TTCAAGTGGT GGCTATGCAT GGGTGGCTCT TTATTATTTC
GCGTTACAAG TTAACCCTAA ATATCGCTGG GCAGGCTTAG CCTTCGGAGT CACACTGGGC
TTGAGTTTTA GTATTACTCA GCAGCTAAGA GGTGCGCATT TTTTCTCTCA TGGGATATGG
AGTTTAGCGA TATCTTGGTT TGTTGCTAGC GGTTATTACT ACCTTTTGTT TGCAAGCAAA
AGATCAGGAA AAAATGCTCT CGTAATGGAA TCGAACAAGA AAGCGTTAAA TAAGCCCAGT
GCTGTTTAA
 
Protein sequence
MSLIQHHAST SETLYEPFSV KHHITLPLLV FLLVASLFEY FQFDLDIAQY IFDWQGGLTY 
WPLKTQWFTS TIMHTGGRDL VILLGVLLFT ALGLSFKIQY LNQYSRNLFC LAMSVVSSIL
IVKFAKDFTH VNCPWDLTRF GGHVAYTAIF SPLPAGTELG RCFPGGHSSG GYAWVALYYF
ALQVNPKYRW AGLAFGVTLG LSFSITQQLR GAHFFSHGIW SLAISWFVAS GYYYLLFASK
RSGKNALVME SNKKALNKPS AV