| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3211 |
|---|
| Symbol | |
|---|
| ID | 5663600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3936609 |
|---|
| End bp | 3937130 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641237870 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_001503062 |
|---|
| Protein GI | 157963028 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.870894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAT TAGCCTTTGC AGCGAGCAGC AGTTCTAAGT CAATTAACAA GCAACTTGCA
ACCTATGCCG CTTCGTTAGT GGACGGCGCA GACGTTGAAA TTCTCGATAT TAACGACTAC
GAAATGCCTA TTTTTAGTCA AGACAGAGAA GAGGAGCTAG GTCAGCCTGA ACAGGCGCAA
AAGTTCTTTG CCAAAATCGG TGAAGCCGAT GCGATTATCA TCTCTTTTGC CGAGCATAAT
GGTTCATACA CAGCGGCCTA TAAGAATTTG TTTGACTGGA CATCGCGTAT CGATATGAAA
GTATTCCAGA ATAAGCCAAT GGTATTGCTG GCTACATCTC CAGGCCCAGG TGGTGCGTCG
AGTGTATTGG CTGCGGCAGC GGGCTCGGCG CCATACTTTG CTGCAGATGT GAAAGCCTCA
CTATCTGTAC CAAGTTTCTT CGATAACTTC GACATGGAGA AGCAACAGCT GCGTAACCCA
GAGTTGCAAG ATAAGTTGAA GAGTGCGTTA GCACTGCTCT AG
|
|---|
| Protein sequence | MKLLAFAASS SSKSINKQLA TYAASLVDGA DVEILDINDY EMPIFSQDRE EELGQPEQAQ
KFFAKIGEAD AIIISFAEHN GSYTAAYKNL FDWTSRIDMK VFQNKPMVLL ATSPGPGGAS
SVLAAAAGSA PYFAADVKAS LSVPSFFDNF DMEKQQLRNP ELQDKLKSAL ALL
|
|---|
| |