Gene Spea_3178 details

Gene Information

• Locus tag: Spea_3178
• ID: 5663567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 3897948
• End bp: 3898733
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641237837
• Product: hypothetical protein
• Protein accession: YP_001503029
• Protein GI: 157962995

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.294574
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGGA TATTGCGGAC GTTTTTCATT TTCTTACTGT TATTGTCGAC TCGAACAGCT 
TTTGCTCATA ATGTCGATCA TGGCCAGAAC AACAGCAAAA ATAACGGTAG TTACGCCGCC 
AAAAAAGCGC TCCCTAAAAA CCTTGCAGGA CTCACAGCCA TCCAGTCCAT GCAATACCAA 
GTGCCTAGAC AGACCAGCGC CGATCTCGAT ACCCTCTATA GCCAAGCCGC AAGCGCGCAA 
GATGAACTAG CCCAACTGCT CAATATGATC ACCACTCAAT CTCAGACTCA ATCTGTTCTA 
GCCGATATAA AGAGCCGTGA TAGAGCCGAA GCTAAGGTGC AAAACAAATT AGATAACGAC 
GCCAGCCAAC TAACAGATAT CGTCAGAGCC AGCATCGTCA GCCACGATAT TCACAACTTG 
ATGCAGGCGT TTGCACTGCT AAAGTCAGAT AGCCAACTCA TCCAAGTTAA AAACCGCTTC 
GCTAGCCCAA AAGAGTCGGG TTACCGCGAC CTAAACTTAT TGGTAAAACT GCCAGAATCG 
CAAATGATAG CCGAGGTGCA ATTGCACCTT GCCGATATCG CCGAGATTAA AAGTGGTGTG 
GAACATAATG TCTACGAGCA GGTACAAACC ATTCAGGCCT CTGCCATGCA AGAGCAACGT 
AACTTAAGTG AGCTCGAAAC CACTAAGATT ACTCAGCTAC GTCAAGCATC CCATAAGCTT 
TATCATAAGG CATGGCTCAA ATATAAACGC AGCGATCAAG CAAACGAAAT CAGCATCGCA 
GCCTAA 

 

Protein sequence

MNRILRTFFI FLLLLSTRTA FAHNVDHGQN NSKNNGSYAA KKALPKNLAG LTAIQSMQYQ 
VPRQTSADLD TLYSQAASAQ DELAQLLNMI TTQSQTQSVL ADIKSRDRAE AKVQNKLDND 
ASQLTDIVRA SIVSHDIHNL MQAFALLKSD SQLIQVKNRF ASPKESGYRD LNLLVKLPES 
QMIAEVQLHL ADIAEIKSGV EHNVYEQVQT IQASAMQEQR NLSELETTKI TQLRQASHKL 
YHKAWLKYKR SDQANEISIA A