| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3174 |
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| Symbol | |
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| ID | 5663563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3887808 |
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| End bp | 3888710 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641237833 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503025 |
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| Protein GI | 157962991 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTAC GGCATCTAAA ACATTTTTCA GCATTAGCTG AATGTAGAAG TTTTAGTAAA
GCGGCTGAAA AGCTAGAGAT AACACAACCT TCTTTAACTC GTAGTATTCA GAAGATGGAA
CAAGATCTTG GAGTACAACT ATTTACTCGA GACTCTAGAC AGGTGAAATT AACCTATCAC
GGTGGGATAG TATTAAAGCA TAGCGATAAC ATTCTAAATC GAGTGCATTT ACTCGAGTCG
GATATAAGAG TAAATAGCGG AAAGCTAGCA GGGAAGCTGG TTATTGGTGG GGGGACTTTA
ACGTCGAGTC GTATATTGGG TGAACTATTA AATGAGTTCG TTAAATATTC TCCATCGATT
AGTGTAGAGC TGCGCGCTAG AGATGTTAGT GAGTTGCATC AACTTCTTGC AAAGGGAGAG
ATCGATCTTT TTGTTGCGGA GACTAAAGTA ACGCAGTTCG ACCAAAGAGA TGATCTTGAA
ATTATAAACT ACTGTAACTC AGTAGGCGTA TTTTGCTGTC GGCCAGGGCA TCCGTTAGTG
AGAGAGAAGA ATCTATATAC ACCTAGACTA AAAGATTTCC CTTTATCCCT GCCAAGAGCA
ACAACGAAAG AGGTTGAGGA CTTATTCGGT GATCTTTTTG ATATAGAGCG ACCAGCTTTT
TCAGGTTTGT TGAGATTCGA GTTGTTTAAT TCAATTAGTT TACCTCTTTA TAACACTAAT
ATGATCTGTC TATTACCAAA ACTTGTTATT GATGAAGAAT TAAAAGCGGG AAGTTTGGTA
TTGCTTGATG TTAAAGATAT GCCACATATA AACGTAGACT TTGGTGCAGT ATATTTAAAG
TCGAAAAATT TAAATCCGGC TGCTAAAGAG TTTATTTCGT TTGTTAAATC TTACGTGAAC
TAA
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| Protein sequence | MDLRHLKHFS ALAECRSFSK AAEKLEITQP SLTRSIQKME QDLGVQLFTR DSRQVKLTYH
GGIVLKHSDN ILNRVHLLES DIRVNSGKLA GKLVIGGGTL TSSRILGELL NEFVKYSPSI
SVELRARDVS ELHQLLAKGE IDLFVAETKV TQFDQRDDLE IINYCNSVGV FCCRPGHPLV
REKNLYTPRL KDFPLSLPRA TTKEVEDLFG DLFDIERPAF SGLLRFELFN SISLPLYNTN
MICLLPKLVI DEELKAGSLV LLDVKDMPHI NVDFGAVYLK SKNLNPAAKE FISFVKSYVN
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