Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3173 |
Symbol | |
ID | 5663562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3886779 |
End bp | 3887720 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237832 |
Product | hypothetical protein |
Protein accession | YP_001503024 |
Protein GI | 157962990 |
COG category | [S] Function unknown |
COG ID | [COG3595] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTCT CATTCATTAG TACACTCATG GCAAGTACGC TTTTTTTAAC CAATATAGTT ATTGCAGGCG AAGCTATCGA ACAACAGCAG ACCGTTCAAG GCAATCCGTT AGTTAAAGTC AAAGTGCAAC GCGGGAGTGT TACCTTTAAG TCTTGGGATA AGAATGAGAT AGCGGTAAAG GGAACCCTTG ACGACCTCAG CGAAGGTTTC ACCTTTTCAG TCAAAGGTAA CAATGTCACC ATTGAGGACA CCCTGCCCCG TCAATACAGT GGTAATAACA CTGAGGGCTC AGAGTTAGTC ATCACTCTTC CTCGCAAGCT TAAGCTTGAA GCAGAGGGCG TATCGGCAAA CTACAGTCTA GATAACCTCC AAGGAGCACT AGAGGTAAGC TCCGTCAGCG GCAATATCAA AGCCACAACT CTTAGTGACA AGACCATGTT GCAAACCGTA TCAGGTGATA TTTTGACTCG AGGTTTAACA GGTAAGAGTC AGCTGCAAAC GGTTTCTGGT GATATAAAAG ATACCCAAAG CACGGGCACA TTAAGCTATC AAATGGTGAG CGGTGAATTA ACGACCGATA CTCAGGCCAG TAAAGTTTCC ATAGAATCAG TTTCAGGCGA TTCAACCATT GCACTTGGCA GTATTGATAC TCTGTCTGTC AAAACCGTGA GTGGTGATGT GGAACTGTCA CTCAACAGCT TACAAAACCG CGCCAAATTG GGCAGTGTCA GTGGTGATAT CGAGATGCGA TTTCTTGGCG ATACCGATGT GAGCTTCAAT ATTAACGGCG GCCCCAGTGG CAAGATCAAT AATAAGTTAA CCGACGACAA GGTGACAAAA GAGAAATACT CGCCCCAAAG CTACTTAAAG TTCCAAACCG GTGATGGCCT CGCAGAACTC AATGCTTCTA CTATTAGCGG TAAAATTGAG TTACTGAAGT AA
|
Protein sequence | MKLSFISTLM ASTLFLTNIV IAGEAIEQQQ TVQGNPLVKV KVQRGSVTFK SWDKNEIAVK GTLDDLSEGF TFSVKGNNVT IEDTLPRQYS GNNTEGSELV ITLPRKLKLE AEGVSANYSL DNLQGALEVS SVSGNIKATT LSDKTMLQTV SGDILTRGLT GKSQLQTVSG DIKDTQSTGT LSYQMVSGEL TTDTQASKVS IESVSGDSTI ALGSIDTLSV KTVSGDVELS LNSLQNRAKL GSVSGDIEMR FLGDTDVSFN INGGPSGKIN NKLTDDKVTK EKYSPQSYLK FQTGDGLAEL NASTISGKIE LLK
|
| |