Gene Spea_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3173 
Symbol 
ID5663562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3886779 
End bp3887720 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content45% 
IMG OID641237832 
Producthypothetical protein 
Protein accessionYP_001503024 
Protein GI157962990 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCT CATTCATTAG TACACTCATG GCAAGTACGC TTTTTTTAAC CAATATAGTT 
ATTGCAGGCG AAGCTATCGA ACAACAGCAG ACCGTTCAAG GCAATCCGTT AGTTAAAGTC
AAAGTGCAAC GCGGGAGTGT TACCTTTAAG TCTTGGGATA AGAATGAGAT AGCGGTAAAG
GGAACCCTTG ACGACCTCAG CGAAGGTTTC ACCTTTTCAG TCAAAGGTAA CAATGTCACC
ATTGAGGACA CCCTGCCCCG TCAATACAGT GGTAATAACA CTGAGGGCTC AGAGTTAGTC
ATCACTCTTC CTCGCAAGCT TAAGCTTGAA GCAGAGGGCG TATCGGCAAA CTACAGTCTA
GATAACCTCC AAGGAGCACT AGAGGTAAGC TCCGTCAGCG GCAATATCAA AGCCACAACT
CTTAGTGACA AGACCATGTT GCAAACCGTA TCAGGTGATA TTTTGACTCG AGGTTTAACA
GGTAAGAGTC AGCTGCAAAC GGTTTCTGGT GATATAAAAG ATACCCAAAG CACGGGCACA
TTAAGCTATC AAATGGTGAG CGGTGAATTA ACGACCGATA CTCAGGCCAG TAAAGTTTCC
ATAGAATCAG TTTCAGGCGA TTCAACCATT GCACTTGGCA GTATTGATAC TCTGTCTGTC
AAAACCGTGA GTGGTGATGT GGAACTGTCA CTCAACAGCT TACAAAACCG CGCCAAATTG
GGCAGTGTCA GTGGTGATAT CGAGATGCGA TTTCTTGGCG ATACCGATGT GAGCTTCAAT
ATTAACGGCG GCCCCAGTGG CAAGATCAAT AATAAGTTAA CCGACGACAA GGTGACAAAA
GAGAAATACT CGCCCCAAAG CTACTTAAAG TTCCAAACCG GTGATGGCCT CGCAGAACTC
AATGCTTCTA CTATTAGCGG TAAAATTGAG TTACTGAAGT AA
 
Protein sequence
MKLSFISTLM ASTLFLTNIV IAGEAIEQQQ TVQGNPLVKV KVQRGSVTFK SWDKNEIAVK 
GTLDDLSEGF TFSVKGNNVT IEDTLPRQYS GNNTEGSELV ITLPRKLKLE AEGVSANYSL
DNLQGALEVS SVSGNIKATT LSDKTMLQTV SGDILTRGLT GKSQLQTVSG DIKDTQSTGT
LSYQMVSGEL TTDTQASKVS IESVSGDSTI ALGSIDTLSV KTVSGDVELS LNSLQNRAKL
GSVSGDIEMR FLGDTDVSFN INGGPSGKIN NKLTDDKVTK EKYSPQSYLK FQTGDGLAEL
NASTISGKIE LLK