| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3168 |
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| Symbol | |
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| ID | 5663557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3879732 |
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| End bp | 3881903 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237826 |
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| Product | exporter of the RND superfamily protein-like protein |
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| Protein accession | YP_001503019 |
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| Protein GI | 157962985 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.210013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCACCA TCTGGCATAT TCAGCGATAT CCAATAATCA TGTTTATGGT TATCGCTGCC
GCGTTACTTA TTTCGCTGAT GGGGTTTCAT CGGCTCAATC TTGATGTGGA TTTTAGCGAT
TACTTTGCCC CTTCTGATCC ACGATTTGTG GCGTTTAACA GCATGATGGA AAAGTTTGAA
CGTCATGATC AGCTTTGGTT GCTGCTAGAG ACTCAACAAG ATTGGCGCGA CAAGGAGCCA
CAAGCCCAGT TAATTAACTT CATAGATAAG CTTAAAGCCA GTCAAGATAT TGTGAGTATT
CAGGGCTATA ACCAGTTTGT ACAAGGCACA GCTAAAGAAG ATAAGATCTT AAATTATAAA
GCTCATCCTC GGCTGGCTTC GGTGCTGTCG GCAAATGGCC AAGGGCTCTT GCTGCAGTTG
CGCTTGAGTA ATCATAGAGT CCAAGACTTT AAAACTCAGA GTCTGTGGTT AGATGATGTA
TTGCAAAGAA TGGATAGTGA TAGTAGCGAA TATTGGCAGC CTTTAGGGGT CAATACATAC
TTTAATGGTA CCCACGCGCT GAATTGGCAA TATGCTAGAG TACTCAGCCA TGACTTGAGT
TGGTTTGCCC CAGCCTTATT AGGCATCATC TTGTTGATGG CGGTGCTGTT TATAAGGCAA
AAGCTATGGG TTTTAGCGCT CTGTATCAAC TGCGGCATTA CTTTAGTATT AAGTATGGGG
CTTGCCGCTT GGTTAAAGCT GACTCTGACG GCGATTACAG CTTTTGTGCC AGTGATTATC
GTCACCCTTG GCTTAGCTTA TGCGTCTCAC CTTTATTTTG GCTGGCGTGG TGAGATTAAT
CGTGGTCAAA CGAATGAGCA AGCCTTGCGC CACGCGGTTA AGATCAATCA GGCGCCGCTA
TTTTACTCTA GCATCACCAC GATATTTGGC TTTAGTCTGT TAATGTTTAG CCCATCCCCT
CCTATTCAAA GCTTTGGTTT GCTGGTGGCG TTTGCAGTGC TGTGCAATTA TCTATTGACT
CTAACAATTC TGCTTTTTTT CGCTCGTCAC TCGAAGCCAT CAATGACTAA AGGGCTAGAC
TTTTCCGGGG TGGTAGCCAT TGCTAAATGG AATGCTGGAC AACCTATGGC TGTGATGACG
GGCATAGTGT TGATAAGCGC CTTTGCACTG GTTAGTGTGT CTAAGCTGAC GTTAAATGAT
GACCCATTAA GTTACTTTGA ATCATCAAAC CCTTTTAGTC TTTCAAGCGA AAAAATGACC
CAATATTTCT CGGGAATTAA TTTACAGCAT TATGTGGTGT CGAGTGCTGC CAATGAGCAG
CTTGCTAAGG CCGAGATTAG TTTTATCTAT AAATTTAGTC GTTTCTTAAA GCGCCAGCCA
CAGGTGGTCA AGGTACAGCA TATCGGTGAT TGGATTAAGA GTGCTGGAGT GGGCCAGAAT
CAGTTTAAAC AGATCTTGGC CAACAACTCT GTTACTGATC TTGGGCTTGC CGGAGAGCTG
TCGGCAGATA AACAATCGAG TTTAGTGACG CTATATTTGC AGCCGATGAC TGCGATGGAG
TTAATCGCCT TCGAGCACAA GGTAGGTGAT TGGCTCGCTG AGCATTCTAC CAAGGTTATG
GTGAGTGCCC CCATAGCCAG TAACTTAATG TTTGCTCATC TCAGCGTTGA AAATGCTAAT
AATATGCTGC TGTCATTCGC CGTGGCGCTG ATTGTTTTGG CGATTTTACT GTGTGTATTG
AAGCGTTCAA TCATCTTTGG GGTTATGGGG TTATTATTGA ATTTTTTACC TCTGCTATGG
GTTTTTGCTC TTTGGCAACT AAATGGCGGC TTTATTAGTT TAGGAACTGC TGTAGTACTA
GGTATGATGC TAGGGATTAT CGTCGATGAT ACTCTGCATT TGATGTTAAA GCTGCCCGAT
AGCAAGGTGT TAAGCGAGCG TGCGATATGG CTGAGTCTGT ACAAGGTGTT GCCGGTTATT
AGCTTTACCA CCCTGACTAT CGCGCTGGGG TTTTCAATTG GTTTGCTATC GGCGTTTGCT
CCTATCGTTC ATTTGAGCTT ACTGTCTTGT TTAGTGGTGA TTTTTGCTTG GGGCTTCGAT
GTGTTGATGT TGCCAGTGCT CTATCGACGT TGGATTTCTT CAAGGCTTTA TAAGGAGGGT
AACTCTAGCT GA
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| Protein sequence | MRTIWHIQRY PIIMFMVIAA ALLISLMGFH RLNLDVDFSD YFAPSDPRFV AFNSMMEKFE
RHDQLWLLLE TQQDWRDKEP QAQLINFIDK LKASQDIVSI QGYNQFVQGT AKEDKILNYK
AHPRLASVLS ANGQGLLLQL RLSNHRVQDF KTQSLWLDDV LQRMDSDSSE YWQPLGVNTY
FNGTHALNWQ YARVLSHDLS WFAPALLGII LLMAVLFIRQ KLWVLALCIN CGITLVLSMG
LAAWLKLTLT AITAFVPVII VTLGLAYASH LYFGWRGEIN RGQTNEQALR HAVKINQAPL
FYSSITTIFG FSLLMFSPSP PIQSFGLLVA FAVLCNYLLT LTILLFFARH SKPSMTKGLD
FSGVVAIAKW NAGQPMAVMT GIVLISAFAL VSVSKLTLND DPLSYFESSN PFSLSSEKMT
QYFSGINLQH YVVSSAANEQ LAKAEISFIY KFSRFLKRQP QVVKVQHIGD WIKSAGVGQN
QFKQILANNS VTDLGLAGEL SADKQSSLVT LYLQPMTAME LIAFEHKVGD WLAEHSTKVM
VSAPIASNLM FAHLSVENAN NMLLSFAVAL IVLAILLCVL KRSIIFGVMG LLLNFLPLLW
VFALWQLNGG FISLGTAVVL GMMLGIIVDD TLHLMLKLPD SKVLSERAIW LSLYKVLPVI
SFTTLTIALG FSIGLLSAFA PIVHLSLLSC LVVIFAWGFD VLMLPVLYRR WISSRLYKEG
NSS
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