Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3087 |
Symbol | |
ID | 5663477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3787762 |
End bp | 3789579 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641237728 |
Product | ATP-dependent OLD family endonuclease |
Protein accession | YP_001502939 |
Protein GI | 157962905 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA ATAAGGTAGA AATAGAGAAC TTCCGTGGTA TTACTGAAGC CGTAATCGAC TTAAACAACT TTACCACTCT AGTTGGCCCA AACAATATTG GTAAATCAAC AATCTTGGCG GCACTAAACC TAGTCTTAGA CAACAAAAAG CCAAAAGCCG ATGACTGGCC AAGTCAGAAG CAAACTGATG ACGTTATGTC TATTACTTGT ACATTCTCTG AACTTGAAGA GTGGGAGCGT AATAAGCCTG CTATATCTCA ACTTTTAAAT GGCGACCAAT TAGTTTTAAA AATGGAAGCC ACTTGGGCAG AAGATACAGA TGCGCCAAGC TGCAAGTACT TAGTGCATCA CGCACCTACG ACCACTCCCT TTACAGGTAA GAACATTTCC CAAGCGCGTG CTGATGAGCA ACTGAATGCA ATCCTAGTTG AACTTGAGGT AACATCGGCT GCTATATATA AAGAGCGAAA AAGTGAAATA GACCAATATA TGGTCGATAA TCATCCAGAA ACTATTATTC GTGAATTAGA TTGGCATGAG AAGACATTCG CAAACTCTCT TCAACAAGCA ATACCTCACG TCATGTATGT ACCTGCTAGC TTCAAGATTG AAGACGAGCT AAAAACGACA GGTACTTCCC CGTTTGCATA CTTATTTAAA AACAAACTTT TTCCTAAAGT GAAATCTGAT GAATCCTACA CTCTTTATAT TGAGAAGGCT CAGAAGCTAC AAGAAAAGCT TAAAGGTCAG GCTGAAGATG GTACTGAAAT TGATGGTCTA TCAACTGCTT TGGAAGCTGT TTCTACTACC TTGAATGATA TTTTGGACTT TGATACCAAG GTTAAACTTG CTGTTGGAGA TATCGATATT GAACCATTAT TCATGAAAGC TGCGACATTC TTGATTGATG AAGAGTTAGA AACTAGCCTT CAATATCAAG GCAGTGGTGT ACAACGAGCA CTCGCATTTG CAATGTTAGA AAGCAATGCC GCGACCGAAG CACAAGTCGA TGGTGCTCAA AGAACAACGA TTGTTTTGTA TGAAGAACCG GAACTTTATA TCCATCCTCA CCTAATGCGT CGATTACGAG ATACACTTCA AACAAGATCT GGTAGTCCAC TATGGCAAGT AATTTGTTCG ACCCACTCAC CATTTCTAAT TGATTTAGCA AATAGGCCGG AGTCGATTAA ATTAATTAAA CGAGCTGACA ACAATAGACG TATCGTTTCA CAGTTACCAA GCGAGCTGTT CGAGCAAAGT GCAGAATATG ACGAAAAAGT CATGTTAAGG GCTGTCCTAG ATTTTCATCC ATCAGTCTGT GAAAGTCTAT TCGCCAAACG AGTTGTTGTG GTTGAAGGCG ACACCGAAGT TGCTGTGTTC TCTATGATTG GAGAGTTAGT CGAAGAACTG AACGTATTAG GCTCGAAACA CAAAGATACA ACGGTTGTTT CAGCAGGAGG TAAATGGACA ATTACCGCTA TAGTTAAAGT TCTAAAAGGG CTTGGGATAG ACTACAAAGT AATCCATGAC ACGGACAGAA AAGGCCTCAC TGATGCTGAA CTTGCCGAGG CAGGTAACCT ACATCCTTTT AAAGCTAATG CGAAGATTGA GGAAATTGCT CTACGCGAAA ATGTTTTCTT AGTACAAGAT ACATTTGAAC ACGTGTTATG GAATGTTGAG ACTGACAACA TCAAAGCTAG TAGCAAACCA TTCCATTCAT GGAAAAGGAT AAGACAGTTC TTAGATGGTG ACAATGATTT ATCTGTTGAG AGTAAAGCCA CTTTAAAAGA GATTATTGAG TTTGCTTTCT GTGACTAA
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Protein sequence | MKINKVEIEN FRGITEAVID LNNFTTLVGP NNIGKSTILA ALNLVLDNKK PKADDWPSQK QTDDVMSITC TFSELEEWER NKPAISQLLN GDQLVLKMEA TWAEDTDAPS CKYLVHHAPT TTPFTGKNIS QARADEQLNA ILVELEVTSA AIYKERKSEI DQYMVDNHPE TIIRELDWHE KTFANSLQQA IPHVMYVPAS FKIEDELKTT GTSPFAYLFK NKLFPKVKSD ESYTLYIEKA QKLQEKLKGQ AEDGTEIDGL STALEAVSTT LNDILDFDTK VKLAVGDIDI EPLFMKAATF LIDEELETSL QYQGSGVQRA LAFAMLESNA ATEAQVDGAQ RTTIVLYEEP ELYIHPHLMR RLRDTLQTRS GSPLWQVICS THSPFLIDLA NRPESIKLIK RADNNRRIVS QLPSELFEQS AEYDEKVMLR AVLDFHPSVC ESLFAKRVVV VEGDTEVAVF SMIGELVEEL NVLGSKHKDT TVVSAGGKWT ITAIVKVLKG LGIDYKVIHD TDRKGLTDAE LAEAGNLHPF KANAKIEEIA LRENVFLVQD TFEHVLWNVE TDNIKASSKP FHSWKRIRQF LDGDNDLSVE SKATLKEIIE FAFCD
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