| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3015 |
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| Symbol | |
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| ID | 5663405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3696561 |
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| End bp | 3697571 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237654 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001502867 |
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| Protein GI | 157962833 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.947427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCGG ATTCTAATAA TGGCGCAATT GCGCTTATTC AGCGCCAAGA TGTGGTCTTT
TTTGCCAGCT TGCTGAGGGG GCTAGAAGGC AGTATTTATC CGATCTTACA GCAAGCAAAG
GTACCGATTG ATCTGTATTC AAGTGAAAGT AATTATGATT ACTTACCTGA AAATACGGTG
AAAAACCTGA TCCAAGCCTT GGGAGAAAGA TTAGAACATC AAGAGTTTAT TCAACTAATT
AGTAGTGCCT GCAAGAATAT CTATATTCCG GAGTTTATCC GGCGTCTGAC ACAGAGCGGG
TCTTTAAGAG AGGCATTAGA CGAGTTTGCC AAGCAGCTAA AGTCCAACAT TACCCATACT
AATGTTTATA CCCAGTTCTC GGGAGGAAGT TGGTGGTTGG TGAGAGAAAA AGAGGGCGTG
GATGAGGCAT GGTTTACCCA TGCAGAACTG TTTTCCGTTA TTTTTACCTG CGAACTCTTA
TCTGCTCTCA CTTCTAATAA ATGGCGACCA AAGCAAGTGG GGATCCAATC TGCTGATGAG
GCCGTGTTTT CTACTTTGCC GCAACTAACA CGGAGTCAGT TTTTTACCAA TAGACCTGTG
ACGGCTTTCT CTATTGAAGA AAGCTTAATG ACGGCGCCTG TTAGCCACCC CTATATTTCC
ACTAAAGATC CTATCGCAGC AATACCATCA CGCGATTGCT TTTTAGGCAC CTTCAAGTTG
GCGATTCAGC CCTATTTGTC TATGGGCAAG CTGCCTATCA AGATGGCGGC GCAAATTCTG
CAATTGAACG TGAGAACCTT ACAGCGCCGA TTAGCGAAAG AAAGTGTTCA ATACGGCGCT
ATTATTGAGG AGATGGTGCT GGAGCAAACC TTGGACTTAT TAAAATGCCC TTCATTAAAG
ATCACCTCCA TCGCGATTAG AATGGGCTAC TCCGACGCTG CACATTTTAC CCGCGCGTTT
AAACGTCAAA TGCAGATGAC GCCTACAGCG TACCGTCGCC AATTCGACTA A
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| Protein sequence | MPSDSNNGAI ALIQRQDVVF FASLLRGLEG SIYPILQQAK VPIDLYSSES NYDYLPENTV
KNLIQALGER LEHQEFIQLI SSACKNIYIP EFIRRLTQSG SLREALDEFA KQLKSNITHT
NVYTQFSGGS WWLVREKEGV DEAWFTHAEL FSVIFTCELL SALTSNKWRP KQVGIQSADE
AVFSTLPQLT RSQFFTNRPV TAFSIEESLM TAPVSHPYIS TKDPIAAIPS RDCFLGTFKL
AIQPYLSMGK LPIKMAAQIL QLNVRTLQRR LAKESVQYGA IIEEMVLEQT LDLLKCPSLK
ITSIAIRMGY SDAAHFTRAF KRQMQMTPTA YRRQFD
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