Gene Spea_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2998 
Symbol 
ID5663388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3674079 
End bp3674648 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID641237637 
Producthypothetical protein 
Protein accessionYP_001502850 
Protein GI157962816 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGCA AACACGACAT TCTTAACGCA TTAAAAAGCG CCGCGATTGC GCCTCAATCC 
ATGCCTGTTA TCGATATTTC GCCGCGAATC GACGATTTAA TCGGCCAGTT TGAAACCAGC 
TTAAACACAG TGGCAGGCAC ATTACACCGT GAAGGTGGCT TAGCTAAGTT GCAGGCACAG 
GTTGATGAAC ATATTGCTCA AGGGATGCAA ATCATCTCTA TGGTTGACGG TGTTAAAGGT 
AATCGCGAAG TGACCGATAC CGCCCACCAG CTAAGAGATA TCGATTACGC AGTGATCCCA 
GGAGACTTAG GCGTTGCCGA AAATGGTGCC ATCTGGGTTA ACAATAAAAA CCTTGGCCAT 
CGCGTGACGC CCTTTATCTG CGAAAACCTA TTTTTGGTAC TAAAGGCGAG CACAATTGTG 
GCCAATATGC ATCAAGCAGC GAGTCGCATC ACTCTTGAAT CCGGAGAGTT CGGTACCTTT 
ATCGCCGGAC CATCTAAGAC TGCCGATATT GAACAAGCAC TCGTTGTGGG TGCTCACGGT 
GCCTGTAGCT TAAACGTGTA TCTAGTTTAA
 
Protein sequence
MSSKHDILNA LKSAAIAPQS MPVIDISPRI DDLIGQFETS LNTVAGTLHR EGGLAKLQAQ 
VDEHIAQGMQ IISMVDGVKG NREVTDTAHQ LRDIDYAVIP GDLGVAENGA IWVNNKNLGH 
RVTPFICENL FLVLKASTIV ANMHQAASRI TLESGEFGTF IAGPSKTADI EQALVVGAHG 
ACSLNVYLV