Gene Spea_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2963 
Symbol 
ID5663353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3627371 
End bp3628447 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content45% 
IMG OID641237602 
Productputative lipoprotein 
Protein accessionYP_001502815 
Protein GI157962781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.881094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAT TAAAATTAAC CCCAATTACC ATCGCTATCG CCACAGGCTT GATGCTATCG 
GGTTGCGGGT CAGACAGTGA TTCTAATGAG CCAGAACAAG CTCTGTTCAG CCTTGGCGTT
TCAGATAATC CTGCAGACGC TAACATAGTC AATGTGGCTT TTAAGCAGGT TATTCTAAAG
AACAGTGAGG GCGCGTTCTC ATTCGATGTC TCAACTGGGG ATGATGGTTT ACAACATGTC
GACCTATTAA GCTTCCAGGG TCAAGATGTT GAAACATTAG TTAGCGGTCA ATCTGTTCCC
GTAGGTGAAT ACCAGATGTG TATTTACATG GAAAATAACA CCATCTCTAG CGATGAAAGC
TCTTATGTAT TAAGTGGTGC AACAGAAGAT GAAAATGGTG ACTTTGTTGG CGGTGACATT
GAAGGCTTAG TCACTAACAG TAACGGCTCT TGTGGTGGTG TCGGGGCCGA TGAAGATAAC
ACAGGTCGCC TCTTCTTTAA TAAATCCTTT ACAATCGCGG CTGGTAACAA CAATTTTGTT
GCCGAGTTTA ACCTAGCTAA AGGCCTGCAA GCTCCCCACG GCAATAAAGA ATACTGGACA
CTAAAACCAA CTTCCGTACA GCTGGTTAAT GCCTCTGACG TTGGTGCAAT TAAAGGCCAG
ATAAGTCAAG CGACAATGGA TAATTGTGAG GCTGCTGCAG GCGGTTCAGA GTTTAGCCCT
GCGGTTTACC TTTACCCAAG TGAAACAGCA CTGGATCAGA TGGCAGACTT TAGAACGGGT
CCAAATGTCT TAACTCAGGT AGCACCAATC ACATCGGCGA GAGTTAACCC AATCCTTGAT
GGCAGCGATA ATGTCACTGG CTATGAATAC GAATTTGGTT TTGTGGTCGC CGACACCTAT
AGCCTTGGTT ACACCTGCCT AGCGCAAAAT GATGATCCAG AAGAGTCTAA CGTCCGTGAA
CCTGAAGATG GTAGCGCGCC GTTTTTTATC GACTCTGCTG AGCAAGACGT CACTGTTACT
CTAGGTGAAA CGACTACACG TCATTTTCCT GAGTCATTTG AGCCTGTCAC GCCTTAA
 
Protein sequence
MKQLKLTPIT IAIATGLMLS GCGSDSDSNE PEQALFSLGV SDNPADANIV NVAFKQVILK 
NSEGAFSFDV STGDDGLQHV DLLSFQGQDV ETLVSGQSVP VGEYQMCIYM ENNTISSDES
SYVLSGATED ENGDFVGGDI EGLVTNSNGS CGGVGADEDN TGRLFFNKSF TIAAGNNNFV
AEFNLAKGLQ APHGNKEYWT LKPTSVQLVN ASDVGAIKGQ ISQATMDNCE AAAGGSEFSP
AVYLYPSETA LDQMADFRTG PNVLTQVAPI TSARVNPILD GSDNVTGYEY EFGFVVADTY
SLGYTCLAQN DDPEESNVRE PEDGSAPFFI DSAEQDVTVT LGETTTRHFP ESFEPVTP