Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2963 |
Symbol | |
ID | 5663353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3627371 |
End bp | 3628447 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237602 |
Product | putative lipoprotein |
Protein accession | YP_001502815 |
Protein GI | 157962781 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.881094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAT TAAAATTAAC CCCAATTACC ATCGCTATCG CCACAGGCTT GATGCTATCG GGTTGCGGGT CAGACAGTGA TTCTAATGAG CCAGAACAAG CTCTGTTCAG CCTTGGCGTT TCAGATAATC CTGCAGACGC TAACATAGTC AATGTGGCTT TTAAGCAGGT TATTCTAAAG AACAGTGAGG GCGCGTTCTC ATTCGATGTC TCAACTGGGG ATGATGGTTT ACAACATGTC GACCTATTAA GCTTCCAGGG TCAAGATGTT GAAACATTAG TTAGCGGTCA ATCTGTTCCC GTAGGTGAAT ACCAGATGTG TATTTACATG GAAAATAACA CCATCTCTAG CGATGAAAGC TCTTATGTAT TAAGTGGTGC AACAGAAGAT GAAAATGGTG ACTTTGTTGG CGGTGACATT GAAGGCTTAG TCACTAACAG TAACGGCTCT TGTGGTGGTG TCGGGGCCGA TGAAGATAAC ACAGGTCGCC TCTTCTTTAA TAAATCCTTT ACAATCGCGG CTGGTAACAA CAATTTTGTT GCCGAGTTTA ACCTAGCTAA AGGCCTGCAA GCTCCCCACG GCAATAAAGA ATACTGGACA CTAAAACCAA CTTCCGTACA GCTGGTTAAT GCCTCTGACG TTGGTGCAAT TAAAGGCCAG ATAAGTCAAG CGACAATGGA TAATTGTGAG GCTGCTGCAG GCGGTTCAGA GTTTAGCCCT GCGGTTTACC TTTACCCAAG TGAAACAGCA CTGGATCAGA TGGCAGACTT TAGAACGGGT CCAAATGTCT TAACTCAGGT AGCACCAATC ACATCGGCGA GAGTTAACCC AATCCTTGAT GGCAGCGATA ATGTCACTGG CTATGAATAC GAATTTGGTT TTGTGGTCGC CGACACCTAT AGCCTTGGTT ACACCTGCCT AGCGCAAAAT GATGATCCAG AAGAGTCTAA CGTCCGTGAA CCTGAAGATG GTAGCGCGCC GTTTTTTATC GACTCTGCTG AGCAAGACGT CACTGTTACT CTAGGTGAAA CGACTACACG TCATTTTCCT GAGTCATTTG AGCCTGTCAC GCCTTAA
|
Protein sequence | MKQLKLTPIT IAIATGLMLS GCGSDSDSNE PEQALFSLGV SDNPADANIV NVAFKQVILK NSEGAFSFDV STGDDGLQHV DLLSFQGQDV ETLVSGQSVP VGEYQMCIYM ENNTISSDES SYVLSGATED ENGDFVGGDI EGLVTNSNGS CGGVGADEDN TGRLFFNKSF TIAAGNNNFV AEFNLAKGLQ APHGNKEYWT LKPTSVQLVN ASDVGAIKGQ ISQATMDNCE AAAGGSEFSP AVYLYPSETA LDQMADFRTG PNVLTQVAPI TSARVNPILD GSDNVTGYEY EFGFVVADTY SLGYTCLAQN DDPEESNVRE PEDGSAPFFI DSAEQDVTVT LGETTTRHFP ESFEPVTP
|
| |