Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2946 |
Symbol | |
ID | 5663336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3606579 |
End bp | 3607121 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237585 |
Product | NUDIX hydrolase |
Protein accession | YP_001502798 |
Protein GI | 157962764 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.908367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCACT CAATGCGCCT GTTAAAATCC ACTATTCATG CCGATATCGC TCACCTAACC GCAGATGAGC TTAAGGCAAA GAGTTTTCAC CGCCAAGCTG CTCGCGGCAT TATTTTAAAG GGTGAAGAGA TCTTAATGCT CTATACCGAG CGCTATCATG ATTACAGTAT TCCAGGTGGT GGCGTCGATG AAGGCGAAGA TATTTGCAGT GGCCTCATTC GTGAATTAGA AGAAGAGACT GGCGCGCAGC ATATCGAGAT CATCAGTGAG TTTGGCCGCT ACGAAGAGTT TCGTCCTTGG TATAAAGACG ATTTTGATGT GGTTCACATG GAGTCGTTCT GCTTTGTCTG CGATATTCAT CCAGAGCTTG GCGAAACCAA GTTAGAAGCC CATGAGATCC AAAACGGCAT GACCCCAGTT TGGATCAATA TTCATCAAGC CATCGCCCAC AACGAACACA CTATGGCCAA CAGCCCTAAG AAAGGCATGT CGATTGAGCG AGAAACTTTT CTGCTAAAGC GTATCGTGGC TGAGCTTTTA TAA
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Protein sequence | MSHSMRLLKS TIHADIAHLT ADELKAKSFH RQAARGIILK GEEILMLYTE RYHDYSIPGG GVDEGEDICS GLIRELEEET GAQHIEIISE FGRYEEFRPW YKDDFDVVHM ESFCFVCDIH PELGETKLEA HEIQNGMTPV WINIHQAIAH NEHTMANSPK KGMSIERETF LLKRIVAELL
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