Gene Spea_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2814 
Symbol 
ID5663206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3435641 
End bp3435988 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content44% 
IMG OID641237455 
Productendoribonuclease L-PSP 
Protein accessionYP_001502668 
Protein GI157962634 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTC AACGTGTTAA CCCATGTGCC AATTGGTCCG ATGCAACAGT GTTTAATAAC 
ATGGTGCATT TTGTTGAGAT TGCAGCCGAT CCTGAAGGCA ATATGCTTAG CCAAACTGAG
CAGTTATTTG CTCAAGCAGA AGCGACATTA GCCAGTGTGG GCAGCGATAA GTCACGTCTT
CTATCAGTGA CTATCTATGT GACTGACTTT GCTAACGTAG CGGTATTTAA TCAGGCGTGG
CAAGCATGGT TACCAGAGGG TTGTGCACCA AGCCGTGCAT GCTTGAAAGT TGAACTTGCC
GATCCTAAAT ATTTAGTTGA AATCGCATTT GTTGCAGCGG TTAAGTAA
 
Protein sequence
MDIQRVNPCA NWSDATVFNN MVHFVEIAAD PEGNMLSQTE QLFAQAEATL ASVGSDKSRL 
LSVTIYVTDF ANVAVFNQAW QAWLPEGCAP SRACLKVELA DPKYLVEIAF VAAVK