| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2760 |
|---|
| Symbol | |
|---|
| ID | 5663153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3373287 |
|---|
| End bp | 3374360 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641237402 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001502615 |
|---|
| Protein GI | 157962581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.762927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATG AATTCACACC TTCTGTTGAT TTAGGTGGTG CAGTTAAAGT TAAGTACTTC
GTTGATGATG GCAATGAAGC ATCTAAGTCA AACGGCGGTA CATTCGCATT TGACGCATTA
GAGCTAGATA TCGATAGTCA GATTAGCGAA AACTGGTCAG CCAGTGCTAA ATACATCTTC
AAAAACTCTT CAAGCAACCA TTTCGTTAAA TACGCTTATG CTGCGTACAA TGGTGTTGAA
GATTGGCAGT TCCAAGGTGG TGTGATCAGC AAGCCATTTG GTAACAAGAG CTTCATCTCT
CACAACTGGT GGGAAAGTAT CAACTACTAC ATGGGCTTTG AAGACGACTA CGATCTAGGT
GCTAAGGCAA TTTATAGCAA AGGTAACTGG ACTTCTGAAG TCGCTTTCTT CAAGAACAGC
GAATACTCGG CATCTGACAG CCGTGGTTAC GCAGCTGATG CGTACACAGG TACTGTAAAT
GGTACAGACT ATAACAACGA AGAAACCAAC ACCTTTAACA TTCGTCAGTC TTACGTGTTA
GACTTTGACA AGCTAACAGT ACAACTAGGT GCATCGTTAG AATACGGTCA GTTATATGAT
TCACTTCATG ACGACCACGG TACTTCTACA GCTTACGCCG TGCATTTAGA TGCACAGTAC
AGCGGTTACC AGCTACAACT GCAAATGGTT GACTACGACT ACGACCAGTA CGATAGTGAA
GGTAAAAACG GCTTGTACGC TATGAAGATG GGCGAAGGCT TCTATGAAGT TGCCGCTAAA
GGTCAAATCT TCGCCGCTAA CATCGCTAAA GCAATGGCCT ATGACTGGGG TACTGTAACT
CTGTACAACG ACTACAGCCA TCTAACACCT GATACTGATA TTAATGCTAA CCTAAATGAC
TCTGTTATCA ACACAACAGG TATGAGCATT GGTGTATCAG ACTTCTACAT CTTCATCGAC
CACATCTACG GTAAGAACGC TGTATGGATC GGTGGCCAGC AAGGTCTAGG TATCGAAAAC
CAAGATGATG ATTTCTACTC TCTATTTAAC ATCAGCGTTG CTTACTATTT CTAA
|
|---|
| Protein sequence | MADEFTPSVD LGGAVKVKYF VDDGNEASKS NGGTFAFDAL ELDIDSQISE NWSASAKYIF
KNSSSNHFVK YAYAAYNGVE DWQFQGGVIS KPFGNKSFIS HNWWESINYY MGFEDDYDLG
AKAIYSKGNW TSEVAFFKNS EYSASDSRGY AADAYTGTVN GTDYNNEETN TFNIRQSYVL
DFDKLTVQLG ASLEYGQLYD SLHDDHGTST AYAVHLDAQY SGYQLQLQMV DYDYDQYDSE
GKNGLYAMKM GEGFYEVAAK GQIFAANIAK AMAYDWGTVT LYNDYSHLTP DTDINANLND
SVINTTGMSI GVSDFYIFID HIYGKNAVWI GGQQGLGIEN QDDDFYSLFN ISVAYYF
|
|---|
| |