| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2748 |
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| Symbol | |
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| ID | 5663141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3358517 |
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| End bp | 3359419 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237390 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001502603 |
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| Protein GI | 157962569 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.388713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTCG ATAAATTTGA TCTCAATTTG CTTAAAGTAT TTTCTAAGGT GATGGAAACC
GGTAGCTACG TGAAGACGAG TGAAGCGCTG GGTATCTCTC CGCCTGCGGT GAGTATTGCG
ATGAAACGCT TACAAAAATC GCTAGAGAAA GAGCTCTTTG TTCGAGGAGG AGGGCAGATC
CAACCCACTG CAGCTGCGAA GGCTTTATAC CAAAATGTTC GGTTTGAACT TTTGTCTATA
GAGACGGTGA TTAGCGCTTT TGGACAGTTT GATCCTCATG TGTCGAAGGC ACACTTTAGC
TTAATGGGCC CTGAAGAATA TAACGCTAAG TTACTGTCTG CATTTGCAGG CGAGCAAAAC
AATGGCTTGA CCTATAGTTT GATGCAACAG GCGAGCACGG ATGAAGAAGC TATTGCGAGT
TTACGAACCC GAATGACAGA CTTGGTTATC GATAGTGTCG TGCTAGCAGA TAGTAGCATC
GAAAGTGAGC TACTGTTTGA AGATAGGATA GTCTTGATTG CAGCAAAAAG TAACTCGACA
ATCGATGAAA ACTTGACCTT CGAGCAGTAT CAAGAGTTGC CGCAATCCGT GCTGAGTTTA
CGTCGAAGCG GTAAGTTGGC TTTGGAGATG TTTCTCGAAG ATAAGCTTGA AGTTCGAAGA
AATATTAGCC ATGAGGCTAG CTCTATTATG GCAAATATAT TGATTGTTAG CCAAACAATG
CTGTTCTGTC ATGTGCCACT CAGGCTTGCT ATACACTACC AAGAGCAGCT CTCTCTTAAA
ATCATAGAAC CACCAATTAG CCTCAAGCCT GTGCCGGTTA TTATGCAGTG GCATAAATCA
AATTCGATAG ATCCTAGTCA TATTTGGTTG CGAAATAGAA TTAAACAGAT ATTGCTGCCG
TAA
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| Protein sequence | MIFDKFDLNL LKVFSKVMET GSYVKTSEAL GISPPAVSIA MKRLQKSLEK ELFVRGGGQI
QPTAAAKALY QNVRFELLSI ETVISAFGQF DPHVSKAHFS LMGPEEYNAK LLSAFAGEQN
NGLTYSLMQQ ASTDEEAIAS LRTRMTDLVI DSVVLADSSI ESELLFEDRI VLIAAKSNST
IDENLTFEQY QELPQSVLSL RRSGKLALEM FLEDKLEVRR NISHEASSIM ANILIVSQTM
LFCHVPLRLA IHYQEQLSLK IIEPPISLKP VPVIMQWHKS NSIDPSHIWL RNRIKQILLP
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