| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2728 |
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| Symbol | |
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| ID | 5663121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3334779 |
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| End bp | 3335696 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237370 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001502583 |
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| Protein GI | 157962549 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA CGTTCGCTAA TCGTGTAAAA TTACCAACTT GCTTAACAAC ATCTTGCTAC
GAAAATATAA TCATGACCCC GTTGAAAATT GAAACTCATA TCAAAGTGCA TTCTAGTGAT
ACCGATGCAG CAAGTCTGCT CGCAGAAGAA ACGGGCTTAT CCAAACAAGC TATCAAGCAA
GCGATGCAAA AAGGGGCTGT TTGGCATGGC CATGGTAAGC AAACCAACCG ACTTCGCCGC
GCAAAAAAAG CCTTAAAGGT TGGGGATGAA CTACACCTTT ACTACAACCA AGCCGTATTA
GATGAAACGG TAACCGATGC AGAGCTGTTG TTCGATGAGG AGCAATATAG TGTCTGGTAC
AAGCCTTTTG GTATGCGTTG TCAGGGCTCG AAGTGGAGCG ATCACACTAC CATAAATCGC
TTTATAGAAA CTCAGCTAAC CCCGCCACGT AATGCTTATA TTATTCATCG ACTCGACTTG
GCGGCGACAG GCCTTATCGT ACTGGGACAC ACTAAGAAGG TAACTGCTGC TATCGCCCAA
CTGTTTGAGA CCCGTGCATT AGATAAGTTT TATCAGGTGA TTGTTGAAGG TAAGTTTCCT
GAAGGTCAGG TGACAATTAA CACTGATGTC GATAATAAAA AAGCCTTATC CCATGCCCAT
ATCCTGGAGT ACAACAGCGA GCTTAACCAG TCGAAAGTAC AAGTAAAAAT TGAGTCTGGG
CGCAAGCATC AAATTCGAAT TCATATGGCT AGTCTTGGTC ATCCGGTTAT TGGTGATCGG
CAACATGGCA ATGGCAGCGA TCTTACGCCT AATCTGCAGC TCACCTCCTG CCATTTAAGC
TTTGTCTGCC CTGTTACCGG TGAAGATAAG GTGTTTGAAC TACCGCAAAG CTACCGACCT
GAGTTTCAAG TACGCTAA
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| Protein sequence | MSQTFANRVK LPTCLTTSCY ENIIMTPLKI ETHIKVHSSD TDAASLLAEE TGLSKQAIKQ
AMQKGAVWHG HGKQTNRLRR AKKALKVGDE LHLYYNQAVL DETVTDAELL FDEEQYSVWY
KPFGMRCQGS KWSDHTTINR FIETQLTPPR NAYIIHRLDL AATGLIVLGH TKKVTAAIAQ
LFETRALDKF YQVIVEGKFP EGQVTINTDV DNKKALSHAH ILEYNSELNQ SKVQVKIESG
RKHQIRIHMA SLGHPVIGDR QHGNGSDLTP NLQLTSCHLS FVCPVTGEDK VFELPQSYRP
EFQVR
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