Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2659 |
Symbol | |
ID | 5663052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3240869 |
End bp | 3241579 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237297 |
Product | hypothetical protein |
Protein accession | YP_001502514 |
Protein GI | 157962480 |
COG category | [S] Function unknown |
COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACCAC GTTTAACCAT TACCGCACTT CTTGCTCTAT GTGGTTCTTC AGCAGCCTTT GCCGCTGACT TCAACATCCC AATGGCTTTC GAATACATCG CAGTTGATGG TCAAGAGATA AAGACTAGCC TTTTCAATCA TAAATCTGAG ATTGAGCTTG ATAAAGGCAC TCATAAAATC GCCATCCGTT ATAACGATCT TGTTGCAGAT GACTTTAGCG ACAGTGAAAC AAATATCAAG TCGAATGCTT TCGTGGTGAC AATTGATGTC GATGGTGATT ATAGCTACCA GCTAAAACCC GCCGATGGTG AGTTTGTTAA AAACCCAAAA AGCTTTGCTA AGGCGCCGCA AGTCGTCATA ACTCGTGAAG ACAAAGGCAA TGTTAGCTAT AAAGTCACCC AGACGAACAT TGGCGAAGAG TCATTCGTTT CTCGCTTATT CAGTGGCAAT AATCCAACTG ACGTTGATGC AGAATCTGCT GCAGTCACAA GTTCTGCTGC GACAGTAGCA TCGATTCCAA CGGCTCCTGT TAGCAAGCCA TCACCCGCTG CCACAGCGAC CATGCCAGCA GTTGCAGCAA CAAGCCCAAC GCCTCCAGTG ACTTCTGCAG AAGAAGCTGC CAAAGCCGAG CAGATGCTAC AATATTGGTG GTTGCAAGCC GACGAGCAAA CGCGTAAAGA ATTCATGAGC TGGGCAATTA AGCAGCTTTA A
|
Protein sequence | MKPRLTITAL LALCGSSAAF AADFNIPMAF EYIAVDGQEI KTSLFNHKSE IELDKGTHKI AIRYNDLVAD DFSDSETNIK SNAFVVTIDV DGDYSYQLKP ADGEFVKNPK SFAKAPQVVI TREDKGNVSY KVTQTNIGEE SFVSRLFSGN NPTDVDAESA AVTSSAATVA SIPTAPVSKP SPAATATMPA VAATSPTPPV TSAEEAAKAE QMLQYWWLQA DEQTRKEFMS WAIKQL
|
| |