| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2565 |
|---|
| Symbol | |
|---|
| ID | 5662958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3124681 |
|---|
| End bp | 3125616 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641237203 |
|---|
| Product | Tol-Pal system TolA |
|---|
| Protein accession | YP_001502420 |
|---|
| Protein GI | 157962386 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3064] Membrane protein involved in colicin uptake |
|---|
| TIGRFAM ID | [TIGR02794] TolA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000197392 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCTA AATCTGATTT AACCTTACCC GTTGTGATTT CAGCTGGGAT TCATATTGGC
GTGATAGTTA TTCTTGCCTT AGGTGTCGAC TTTTCAGATA AGCCGAAACC GCAGCCACAG
GCGAGTGCGC CAGCGGTTCA GGCTGTGGTT GTAGACCAAA AGCGGGTTGC TGAGCACGTT
GAAAAGTTAA AAGCTGAAAA GCGAGAGGCT GAACGTAAAG AAAAGGCCCG TCAAGACGAT
GCGGATAGAA AAGTTCGTGA AGCTCGCAAA GAGCGAGAAC GAGAACAGGC CCAAATTAAG
CGACTTGAAC AAGAGCGCAA GCAAAAAGAG ATTGAAACAA AAAATGCAGC CGACGCGGCG
AAAGCTGCAC AGCTAAAACA GAAACAGGAA AATGAGAAAG CGGCTAAGGC TGAAGCTGAG
CGTAAGCAAA AAGAAGCTGA GCGTAAAGCC TCTGAGGAAG CGGCGAAAAA AGCGGCAGAT
AAACGTAAAG CTGAAGAAGC GGCAGCTAAA AAAGCCGAAG ATGAACGAAA ACGTAAAGCT
GAAGCCGAAC GTAAGCGCAA AGCGGAAGAA CAAGCCCGGC GTGAGCAAGA GCAGATGATG
CAAGATGCAC TGGCTGCCGA GCAAGCGGCA CTTTCTCAGA CTCGTAATAA GCAAGTCATG
ACTGAAGTGC AGCGTTATAC CTCTATGATC CGAGCAACCA TTCAGCGTAA CTTAGTGGTT
GATGAATCTA TGCGCGGTAA GAGTTGCCGG GTATTCATTC GTTTAGCTAA TGATGGATTT
GTGACAGCGA GCCAAACACT CGATGGTGAT AGCGTAGTTT GCCGTGCGAC TAAAGCTGCG
ATTAATAAAG CGGGCAGGTT ACCGGTATCG AGCGAACCAG ACGTTTATAA CAAGCTAAAA
GAAATCAATT TAACAGTTCA ACCTGAGTTT GATTAA
|
|---|
| Protein sequence | MAAKSDLTLP VVISAGIHIG VIVILALGVD FSDKPKPQPQ ASAPAVQAVV VDQKRVAEHV
EKLKAEKREA ERKEKARQDD ADRKVREARK EREREQAQIK RLEQERKQKE IETKNAADAA
KAAQLKQKQE NEKAAKAEAE RKQKEAERKA SEEAAKKAAD KRKAEEAAAK KAEDERKRKA
EAERKRKAEE QARREQEQMM QDALAAEQAA LSQTRNKQVM TEVQRYTSMI RATIQRNLVV
DESMRGKSCR VFIRLANDGF VTASQTLDGD SVVCRATKAA INKAGRLPVS SEPDVYNKLK
EINLTVQPEF D
|
|---|
| |