| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2516 |
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| Symbol | |
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| ID | 5662909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3064855 |
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| End bp | 3067224 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237142 |
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| Product | cell wall anchor domain-containing protein |
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| Protein accession | YP_001502371 |
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| Protein GI | 157962337 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.27375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGGT ATTTTTCTAG ATTCAGTCAT CGCCAAGGAG GCCCCCGTTT GGGGGCTTTA
ATGGCAGCTA AAACTAATTT GAAACTGGCA ATGGTGTCGA TGTGTTGCTT ACTGTTGCCA
ATGAACGCTA TAGCAATGCA AACGACAGAA CCCTTTAGCA TTGATGCAGT TAAGCAGGGG
AGCCTAGTGT TTGAAAATCC CCAAGGTGAG ATAGCGTTGG CACTACCGAT GAAAACCGAC
GTCAGTATGC AGGTATCTGG CTGGATTAAC CGAGTGTCGG TTCGCCATGA ATTCAAAAAT
ACCAGTACAG AGTGGGTTAA TGGTCAGTAT CTATTTCCCC TACCTAATGA GGCGGCCGTT
GATCAGCTCA GACTTCATAT CGGTGACAGG ATTATAGAGG GACAAATTCA GCCTAAGGCT
AAGGCAAAGG CGATATTTGA ACAGGCTAAA TCTCAGGGGA AGAGGGCCAG TTTGCTGGAG
CAGAAAAGGC CTAACATCTT TAGCGCTAAG GTTGCCAATC TAGCCCCTAA TGAGATGCTG
GTGGTGGAGT TGACCTATCA AGAAACCTTA GATTATCGAG ATGGTGAATT TAGCTTGCGA
TTTCCTATGG TTGTCGCGCC AAGATATGCG CCTAGGCAGG CTGCCTATCC TCGCCAGAAA
GAAAGTGCCC ATCTAAAAGA AAGCGTCTAC TTAAAAGATA GTGCAAAAGC CCTCAGTGAT
GAGATTGATA GCAGTGTTAA GCCTGCTGAA TATGCACAGT ATTATGCCAA AAAACAGCTA
AGTTCATTTG ATATTCACGA CCAAGTTTCA GCTCCGGAAC GCATATTTGA TGAGGCACCA
ATGGCAGAGC AGCATAATAA CCGAGTGGCA TTAAAAGTGG CATTTGATAG TGAGATGCCA
ATTGAGCATA TTCGTAGCCC CTATCATCAA ATTAATGTGG ATATGGCTGA GAGTGGCGGG
GCAATCGTCA GTTTAAATCG TGATGCTATC GCCAATAAAG ACTTTGTATT GACCTGGAAA
CCGATTCAAG GCAATGAGCC TACGGCGGCG GTCTTTTCAC AAATAGGCAA AACTCATACC
TCACAAGCTA GCTCATCAGA AGCGTCAACA GAGCCGCAAA CTGCGAGTGA GAAATATGGA
TTGGTGATGT TAATGCCGCC TCAAGGCGCA GAACAACAAC CTTCGTCTAT TCATCGGGAG
CTGATCTTAG TCATAGATAC TTCAGGATCT ATGTCGGGAG ACGCCATCAT TCAGGCTAAG
ACAGCACTTA AATATGCCTT AGCCGGGCTT AGACCTACAG ACAAGTTCAA CATTGTGCAG
TTTAACTCAG ATGTCGATAA ATGGTCTGGA ATGGCCATGT CTGCAACGCC ATACAATCTT
GCTCAGGCAC AAAACTATAT CAATCGCCTA GAGGCCAATG GTGGCACTGA GATGTCGATA
GCGATTAATG CGGCGCTAAA TATTGAGACT GTGACAGATA AGGAGACTGG GACTGAACTT
GATAATAACG ACCTAGGTTC AAATTTATTG CGGCAGGTGC TGTTTATTAC CGATGGCGCA
GTCTCGAATG AGTCTATGTT GTTTGAGCTG ATAGAAGCAC AGTTAGGCGA TAGCCGTTTA
TTTACTATAG GAATTGGCTC GGCGCCCAAT GCTCACTTTA TGCAAAGGGC TGCGCAGCTT
GGGCGAGGCA CCTATACCTA TATCGGCAAG CTAGATGAAG TAAATCAGAA GGTGGTGAGC
TTACTCAAGA AGATAGAAAA GCCTCAAGTG ACAGATGTCG ACCTTCGTTT TAGCGATGGC
AGCGTACCCG ATTATTGGCC AGTCCGCATT CCAGACCTTT ATGCTCATGA GCCGTTACTG
GTTGCGGTGA AACTGCCAAG CTATGCCAGT AGCGACCTGT TAGTTCAAGG CCTGTTAGCG
GGTCAGTTTT GGCAACGCCG ATTATCGGTG AGTGCTACAG AGCAAGCCAA AGGGTTAGAT
CTTGTTTGGG CGCGCAAGCA GATAGCCGCT TTAGAGCTAA GTAAGCAGGC AGCTAATCGA
GAACGAATCG AAAAGCAGAT CACAGCAATA GCAATGAACT TTCATATTAT GAGTGCCTAT
ACCAGCTTAG TGGCGGTGGA CTTAACGCCA TCAAAGCCAG AAAGTATTGA GGTAAAACCT
GCCAAGGTGA TGCTGCATCT GCCGAGTGGT TGGCAAGCTC TGTCTACATC TCAGTCGTCC
ATCTTGCCGC AAACGGGGAC GAACAGTTAT GTATTCATTG TTTTTGGATC AGTGTTATTG
CTCTTAGCGA TTCTTTACCG TCTGTCTTTT AGTCGACTGG GAATTAGTCG AGTGGGAATT
AGTCTAGGTG CTTTCAGGGA ACTAGAGTGA
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| Protein sequence | MTRYFSRFSH RQGGPRLGAL MAAKTNLKLA MVSMCCLLLP MNAIAMQTTE PFSIDAVKQG
SLVFENPQGE IALALPMKTD VSMQVSGWIN RVSVRHEFKN TSTEWVNGQY LFPLPNEAAV
DQLRLHIGDR IIEGQIQPKA KAKAIFEQAK SQGKRASLLE QKRPNIFSAK VANLAPNEML
VVELTYQETL DYRDGEFSLR FPMVVAPRYA PRQAAYPRQK ESAHLKESVY LKDSAKALSD
EIDSSVKPAE YAQYYAKKQL SSFDIHDQVS APERIFDEAP MAEQHNNRVA LKVAFDSEMP
IEHIRSPYHQ INVDMAESGG AIVSLNRDAI ANKDFVLTWK PIQGNEPTAA VFSQIGKTHT
SQASSSEAST EPQTASEKYG LVMLMPPQGA EQQPSSIHRE LILVIDTSGS MSGDAIIQAK
TALKYALAGL RPTDKFNIVQ FNSDVDKWSG MAMSATPYNL AQAQNYINRL EANGGTEMSI
AINAALNIET VTDKETGTEL DNNDLGSNLL RQVLFITDGA VSNESMLFEL IEAQLGDSRL
FTIGIGSAPN AHFMQRAAQL GRGTYTYIGK LDEVNQKVVS LLKKIEKPQV TDVDLRFSDG
SVPDYWPVRI PDLYAHEPLL VAVKLPSYAS SDLLVQGLLA GQFWQRRLSV SATEQAKGLD
LVWARKQIAA LELSKQAANR ERIEKQITAI AMNFHIMSAY TSLVAVDLTP SKPESIEVKP
AKVMLHLPSG WQALSTSQSS ILPQTGTNSY VFIVFGSVLL LLAILYRLSF SRLGISRVGI
SLGAFRELE
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