| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2515 |
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| Symbol | |
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| ID | 5662908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3064166 |
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| End bp | 3064855 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237141 |
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| Product | sortase family protein |
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| Protein accession | YP_001502370 |
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| Protein GI | 157962336 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.348325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAATC AAACAGAGCA GGTCGTTAAA TCAAATAAAG ATGCAGAGGG TTCTAAAAAG
CTCTGCAGAG ACTTTAATCG GTATTTTCCA TGGCTATTAG TTGCTACGGG GATAGCGTTA
ATTATTCAAG GTGGATATAT GCAAGTGAAA GCACATTTTG CCCAGTTTCT TATTCAGCAG
GCTTGGCAAA GAACACTCGA AGATCGCAAA CCCCATAAAC CTTGGTCATG GGCAGATACT
CATCCCGTTG CCAAATTGGA GTTTTTGCCA AGCGCAGAGG TTCAAGACCA TATTGAAAGC
CAAAATACTC TAGATACACA TGATAGTGGC CAAGGTGATA GCCTTTACGT GCTATCAGGG
GCATCGGGTC GAAATCTGGC CTTTGGGCCG GCACTGATGC TATCGAGTTC AGAATTTGAT
GAGCAAGGTA ATACGGTTAT CGCAGGTCAT AGAGACACGC ATTTTGCTCG ATTAAATGGG
GTTAAAGTGG GGCAGTTGAT AAAGGTTCAA AGTGCTTCAG GTAAGCGCCG TCTGTATCGA
GTGTTCGCAA CCCTAGTGAC CCATGAGTCT GATATGAGTG TGACTCAAGA CAGCCATGAT
AAGCTGTTAA CCTTAGTGAC CTGCTACCCA TTTGGTGCAA GCTTTGCAGG TGGACCACTA
CGGTTTGTGG TTAAAGCTGA GCCAATTTAG
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| Protein sequence | MANQTEQVVK SNKDAEGSKK LCRDFNRYFP WLLVATGIAL IIQGGYMQVK AHFAQFLIQQ
AWQRTLEDRK PHKPWSWADT HPVAKLEFLP SAEVQDHIES QNTLDTHDSG QGDSLYVLSG
ASGRNLAFGP ALMLSSSEFD EQGNTVIAGH RDTHFARLNG VKVGQLIKVQ SASGKRRLYR
VFATLVTHES DMSVTQDSHD KLLTLVTCYP FGASFAGGPL RFVVKAEPI
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