| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2437 |
|---|
| Symbol | |
|---|
| ID | 5662830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2978204 |
|---|
| End bp | 2982265 |
|---|
| Gene Length | 4062 bp |
|---|
| Protein Length | 1353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641237063 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001502292 |
|---|
| Protein GI | 157962258 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.240748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTT CCAATACACA ACCGAGTAAT GAAACCAAAA CCGCAAAGAA CCCCACTAAA
ACAAAATCTT GGTATATGCG ACTTTGGGGC TGGTTTAAAC TCTTAAGCCG TTTTGTCATC
TACACGCCAC TATTGCTGCT TGTTTTCCTT GCTATGCTAA TTGGCACTCA GTTTGGTAGT
CATATCGCTA TTAAGCTTGC CGATCTTTTT GTGCCCGATT TGGAACTAGA TTATCAATCG
GGCCAGCTAA ACCGCAGTCT GGGCCTAAAC TATGCCGCCT GGCAGATGAA CGGCGTCAAA
GTCGAAGTCA CCGACTTAGA GCTTGCATGG AACCCTATGT GTTTGATGCA GAAACAGCTG
TGTGTGGAGC AATTGAATAG TTCAAAAGTT AACGTTGAGA TCGATACAGC CTTGATTGGT
GAAGGTGTCG ATACACCTTA CAATACCTCC ATTGATACCG CGCCCGACTC AAGTTTAACG
CCTGAGATAC CATTAGCCAA TGACGCAAAG CCTATCGATG AGCCGGTTAA TGATGCACTT
GCCCCCACAG AAGAGAAGCA CTTAGAGATC ACCCTTCCTT TTGGGATTAG CCTAGTGAGT
GGTGCCCTGC AAAATGTCAC CGTGCGTGTA AACGATATGG ACTTTAATGC TAATCAACTT
AATTTAAGTG CTGATTGGCT ATCGACTGGG ATCCGCGCCA GTTCAATCTA CTCTGAAGGC
CTGTTGGTCT CTATCCCTTT CTCAGACTCA AGCTCAGAAT CAGAAGATGG CGTAAACAGT
GACAGTCTGG CTAAGGCTGA AACTGAAACT GAAACTGAAA CAAAAGAGAG CACTAAGCCA
AGCGGTACTG AGGCCAGTCA AGCTCAAGGG AAAGCGCCAA AGCAAGAGGC TGAAGATGAC
CAATGGGTTA TGGCAAACCT ACCCGAAGTC TTTATGCCGA TCCCGGTTTT TGTAGAAAGT
TTAGATATCG ATAATGGGGA CTTGGTCTTG GGCACAAGAA AAGATCACTT TTCTAAACTC
CACTTAGCCG GAAGTTACCA GCAGTTCTTA ATCAATATCG ACGATTTTAG CGCCAGCCAT
GATTATGGTG ATATCCGTCT CACAGGACAG ATGTCGCTCA TTGACGATTA TCCTATGGAC
ATTGAGTCTT CAATTAAATT GGCTCATGTC GCGGAATTAC CAGGGCTTGC CAACCAAACT
TTAGCTATAT CAGTCAAGCA GGGCTTTGAA TCGCTTAAGA GCCATATCCT TGGTAGCGGC
CAATTTGATT TCACTATTGA CTCTACAATT GAACTAGCTA AGCCAAAGAT CCCATATCAG
CTGACATTAA ACGCCAAACA GCTACAGTGG CCGCTTAAAA CTGCCGACTT TAGGGCAAAT
GACATCAAGT TTTCTAGCCA AGGTAACCTC GACTCTCAAC AGGTTACACT ACAAACCCTA
TTTTCTTCTC CCTACCAGCC AACACTCGAT GTTGACACTG TGTTCAGTCA CGCCGAGAAC
CGTTTTGTTT TTGATAAGCT ACACGCCAAT AATCAAGCGT TAGGCGATAT TGCTCTGCAA
GGTTCATTCG AATACGGTGA GAACTTAATC TGGCATGCTA AAGTCGCAGC CCAGCAATTC
GATACAGGTC TATTAAACCT TGGCTTATCG GAGCCATTAC CGAGTAGCGA GATCACTGGC
CCTTTAAACA CCCATGGCCG ATTCAATCTC AATGATAATG CTTGGTCTAT CGATGTCGAA
GATGCGCACC TTAATGGGCA TATCATGCAT TACCCCCTAA ATGTTGATGG CGGGTTATCC
ATGAACAGTA AATGGCATTT AAGCTCACAA GGACTGAATG TGAGTGCATT ACAGAGCCGT
CTGTTCATTC AAGGAGAGGT CGATAAAGTC TGGTCACTTA ACGGCAAGCT ATCAGTACCA
GACTTAAGTT TATGGCAGCC AGATGCTAAA GGCGCGATTA ATGCCGATAT CCAGGTCTCT
GGTGAAAATG AGCACCCTAA CATTGGCGTA TCATTAATTG CCGAAGAATT ACAGGCTCTT
GAACTGGAGT TAGCCAAGCT GACTCTAAAC GGAAACTATA AACCTTTCGA TAATCAAGGT
TTCATTGCAT CATTCAATCT GCAAGACTTT AAGTATCAAG ACTTAGCTCT CTCGAGTATC
GGCCTTAACG CCCAAGGCGA CTTAAATGAG CAGGCCCTGT TGCTGACGTC TCAGGGAGAC
TTGGTGTTAA ATACCGATTT AACCAGTGAG TACGACCAAG AGAAACAGCG ACTGAGAGCT
CAAGTCAAAC AACTATCATT ATCCTCTCGA CTCGGTGATA TTAGCCTCGA CGCCCCTTTC
TCTGCCGATT ACAGTTTAGA GAGCCAAGCA GGTAGCATCG CACCGTTTTG CTTATCACAC
ATTGGTGGCA AATTATGTTC GAAAGAGCCG ACACAATTGG GCTTAGATGG CAATGCCGCA
CTCGAGTTTG TTGGCGATCT TGGTGTACTC GCTAAGCCCT GGTTACCTGA AAGTCTGCAA
TGGACGGGAC CTGCAACACT CACCTCAAGA TTTCAATGGT TTGAACATGC CAAACCCATT
GGCAGCGTCG AACTTCAACT GCAAGCTGGC AATATTGACT TTCAAGCCAC CAATAATAGT
GACGTGGCTA TTGGTTACAA ATCCGTACAG CTACGAAGTC GCTTAGATGA AAAACAGCTG
ATGACCTCGT TATCCCTTGA GTCCTATGAC ATTGCTAGTA TGGAAGCTAA TCTTGCAATC
AATGTCACCC CAGATAGAAA CATGCAGGGT AAGCTTTCAC TGCATCAGAT AAACCTACAA
GCCTTAGCAG AGTTATTGCC GGAGCTTGAA GTACTGGAAG GTAAGATCTC AAGCGAGCTA
GAGATAAGTG GCAGTTTGAG TGAACCAGAG GTTTCTGGCG AGATCGCACT CAATAACGGC
TCCATTATGG CGACGGCGAA CCCGACATTA CTAGAGGATG TCGATCTCGA CTTCATCTTT
GCAGGTAAGA AGGCCAAAAT CGATGGCGAG CTAAAAATGG GTAAAGGCCA AGCCTATGTC
GATGGTGAGC TAGATTGGGC CGAGCAAAAC CTTAAAGGGG CTTTCGGTAT AAAAGGCGAC
AATTTAGCGG TGATCCAACC GCCATTGGCC ATTTTGAACG TAGGCACTGA TCTACAAGTT
AAGTTCACTA ACGAGTCTTT CGATATTAGC GGTGACATCA ATGTCCCTTC CGGTCGGATC
ACCATAGTGC AACTCCCAGA AGGTGGCGTC GCCGTTTCTA AAGATGTTGT CTTTGATGAC
AGTTTAGCCA CCACCGAACA ACAAGTGTCT CCAATGGCCG TGTCTGCAGA GGTTAACCTC
AATGTCGGTA ATAAGTTACG GGTGGACGGC ATGGGACTGA CAGGCAAGTT GCAGGGGAAA
TTGGAGCTTA AACAGAGCCC ATTTAGACCG CCATTGCTCT TTGGTGAAAT AAAAGTTATC
GATGGCAACT ACAAATTTAT GGGACAAACA CTCGACATTA GAGCCGGTGA AATGCAGTTT
ATTGGCCCGA TAGACGTCCC CAACCTCAAT ATCGAAGCTG TGCGTGAGAT AAAAGATGAA
GATGTCATTG CAGGCGTTCG CATAACCGGT ACGCCGATGA AACCTATCGT TAACCTATTT
TCATCACCAG CCAAAGAGCA GGCGGAGATC TTAAACTATA TTGTTCGAGG AACAGGCCTG
AACAATACCA GTGTCGATCA AAACAGTGGC TTAATGATGG GGGCTGCGCT GTCGCTAAGT
AGCCAAATTG GTGGTGGCGC CATAGGCAAT ATAGGTAACA CAGCTACAGG CATCATTGAA
AAGATTGGAT TTTCAAATGT GCAGCTCGAT GCTAATGATG ATGGCCGCTT TGCCATTAGC
GGATTTATCG GTGATAAGTT GATGGTCAAA TATGGGATCG GAGTGTTTAA TCCGGGTTAT
GAGATGACCG TGAGGTATTA TCTACTGTCT CAGCTTTATC TCGAAACAGT ATCGGGCACC
ATAGAGCAGT CTCTCGACCT CTACTACCGC TTCGATCTGT AA
|
|---|
| Protein sequence | MTASNTQPSN ETKTAKNPTK TKSWYMRLWG WFKLLSRFVI YTPLLLLVFL AMLIGTQFGS
HIAIKLADLF VPDLELDYQS GQLNRSLGLN YAAWQMNGVK VEVTDLELAW NPMCLMQKQL
CVEQLNSSKV NVEIDTALIG EGVDTPYNTS IDTAPDSSLT PEIPLANDAK PIDEPVNDAL
APTEEKHLEI TLPFGISLVS GALQNVTVRV NDMDFNANQL NLSADWLSTG IRASSIYSEG
LLVSIPFSDS SSESEDGVNS DSLAKAETET ETETKESTKP SGTEASQAQG KAPKQEAEDD
QWVMANLPEV FMPIPVFVES LDIDNGDLVL GTRKDHFSKL HLAGSYQQFL INIDDFSASH
DYGDIRLTGQ MSLIDDYPMD IESSIKLAHV AELPGLANQT LAISVKQGFE SLKSHILGSG
QFDFTIDSTI ELAKPKIPYQ LTLNAKQLQW PLKTADFRAN DIKFSSQGNL DSQQVTLQTL
FSSPYQPTLD VDTVFSHAEN RFVFDKLHAN NQALGDIALQ GSFEYGENLI WHAKVAAQQF
DTGLLNLGLS EPLPSSEITG PLNTHGRFNL NDNAWSIDVE DAHLNGHIMH YPLNVDGGLS
MNSKWHLSSQ GLNVSALQSR LFIQGEVDKV WSLNGKLSVP DLSLWQPDAK GAINADIQVS
GENEHPNIGV SLIAEELQAL ELELAKLTLN GNYKPFDNQG FIASFNLQDF KYQDLALSSI
GLNAQGDLNE QALLLTSQGD LVLNTDLTSE YDQEKQRLRA QVKQLSLSSR LGDISLDAPF
SADYSLESQA GSIAPFCLSH IGGKLCSKEP TQLGLDGNAA LEFVGDLGVL AKPWLPESLQ
WTGPATLTSR FQWFEHAKPI GSVELQLQAG NIDFQATNNS DVAIGYKSVQ LRSRLDEKQL
MTSLSLESYD IASMEANLAI NVTPDRNMQG KLSLHQINLQ ALAELLPELE VLEGKISSEL
EISGSLSEPE VSGEIALNNG SIMATANPTL LEDVDLDFIF AGKKAKIDGE LKMGKGQAYV
DGELDWAEQN LKGAFGIKGD NLAVIQPPLA ILNVGTDLQV KFTNESFDIS GDINVPSGRI
TIVQLPEGGV AVSKDVVFDD SLATTEQQVS PMAVSAEVNL NVGNKLRVDG MGLTGKLQGK
LELKQSPFRP PLLFGEIKVI DGNYKFMGQT LDIRAGEMQF IGPIDVPNLN IEAVREIKDE
DVIAGVRITG TPMKPIVNLF SSPAKEQAEI LNYIVRGTGL NNTSVDQNSG LMMGAALSLS
SQIGGGAIGN IGNTATGIIE KIGFSNVQLD ANDDGRFAIS GFIGDKLMVK YGIGVFNPGY
EMTVRYYLLS QLYLETVSGT IEQSLDLYYR FDL
|
|---|
| |