| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2416 |
|---|
| Symbol | |
|---|
| ID | 5662809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2946946 |
|---|
| End bp | 2947857 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641237042 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001502271 |
|---|
| Protein GI | 157962237 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.858381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATG ACAATATTAA CGCTGTTTTG CAGCAACTCG ACACAGTACT ACTCGGTAAG
CCTCACCAAA TTAAGCTAGC GCTGACCTGT ATTTTAGCTA AGGGGCACCT GCTTATTGAA
GATCTTCCCG GTATGGGGAA GACCAGTCTC TCTCAAGGTT TGGCGCAAAC CTTAGGCCTG
AGTTACCAAA GGATCCAGTT TACTAGCGAC ATGCTGCCAG CCGATATTCT TGGCGTTTCC
ATTTTCGATA AAGAACAGTC TCAATTTACA TTTCATCCGG GTCCGATTTT TAGGCAGATG
ATCCTCGCCG ATGAGATCAA TCGTGCCAGC CCTAAGACCC AGAGTGCGTT ACTAGAAGCG
ATGGCAGAGC AACAGATCAC CGTAGATGGT AAGACCCTCC CATTACCGCA ACCCTTTTTT
GTCATCGCGA CTCAAAATCC CTGTGAACAA TCGGGCACAT TTCCACTTCC AGAATCACAG
CTTGACCGAT TTATGATGCG GATAGCCATC GGCTACCCAG CGCCCAAGGC TGAACTGGCA
ATGTTAAAGG GGCAAGATAG CACTTCAAGT GAACGAGTCT TACCTCAATG CCTAACCCAG
TTAACCTTGC AAGAGTTACA GACACTGACT CAAGAAGTCA GCGCGTCAGA CTCTCTGCTG
CAATATATTC TCGCCTTAGT TAACGCCTCT AGAGCTGAGT CTCAAGGCTC AGGACTCTCT
CCAAGAGCCA GCAAGGCAAT ACTGCAAGCC GCGAAAGCTT GGGCGATGAT CCATGGGAGA
AAATATCTAG TCCCAGAAGA CGTTCAAGCG ATATTTCCCC ATGTAGCAGA GCACAGAATT
AGACAATTTT CTCATCAGCA AGGTGAGGCG CTATCGGCTA AAATTCTCAA TAAAGTCAAC
CCAATACTTT AG
|
|---|
| Protein sequence | MHNDNINAVL QQLDTVLLGK PHQIKLALTC ILAKGHLLIE DLPGMGKTSL SQGLAQTLGL
SYQRIQFTSD MLPADILGVS IFDKEQSQFT FHPGPIFRQM ILADEINRAS PKTQSALLEA
MAEQQITVDG KTLPLPQPFF VIATQNPCEQ SGTFPLPESQ LDRFMMRIAI GYPAPKAELA
MLKGQDSTSS ERVLPQCLTQ LTLQELQTLT QEVSASDSLL QYILALVNAS RAESQGSGLS
PRASKAILQA AKAWAMIHGR KYLVPEDVQA IFPHVAEHRI RQFSHQQGEA LSAKILNKVN
PIL
|
|---|
| |