| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2368 |
|---|
| Symbol | |
|---|
| ID | 5662761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2888514 |
|---|
| End bp | 2889245 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641236990 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_001502223 |
|---|
| Protein GI | 157962189 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR00740] methyltransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0147132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTT CACAAGACAA TCTCTTTGCC AAGCCGTACG AACATGTCAG CGATTTTCAA
TTCGATGACA AAGTAGCAGG TGTATTTAAC GATATGATCA GACGCTCTGT TCCTGGTTAT
GGTCAAATCA TCAATACCAT AGGTGATTTA GCACAAAAAT ATGCTACCCC TAACAGTAAA
ATTTATGATT TGGGTTGCTC ATTAGGCGCC GCCACATTGA GTATTCGCCG CCGTGTCGAA
GGCCGTAACT GCCAAATCAT CGCTATAGAT AACAGCGAGT CTATGATTGA GCGCTGTAAT
GAAAACTTAT CGGCTTATGT TAGTGAAACG CCTGTAGAGC TAGTCTGTGG TGATATTCGC
GATATCAAAA TAGAGAATGC CTCTCTAGTC GTACTTAACT TTACGATGCA ATTTCTCGCT
CCTAGCGATC GTGAAAGTCT GCTTAAAAAT ATTTACCAAG GTCTTGTGCC TGGTGGTTTA
CTCGTACTGT CTGAAAAGCT CTACTTTAAA GAAGATAATA TCCAGACAAC ATTGGATGAT
TTACACCTCG ATTTCAAAAG AGCAAATGGT TACAGTGAGT TAGAGATCAG TCAAAAACGC
AGTTCGTTAG AGAATGTAAT GAAGCCTGAT ACGCTCGTCG AGCACGAAAA TAGGATCAGA
GCACAAGGGT TTAGCCAGTT CAGCGTTTGG TTCCAATGTT TTAATTTTGC ATCAATGGTG
GCAATTAAGT GA
|
|---|
| Protein sequence | MNSSQDNLFA KPYEHVSDFQ FDDKVAGVFN DMIRRSVPGY GQIINTIGDL AQKYATPNSK
IYDLGCSLGA ATLSIRRRVE GRNCQIIAID NSESMIERCN ENLSAYVSET PVELVCGDIR
DIKIENASLV VLNFTMQFLA PSDRESLLKN IYQGLVPGGL LVLSEKLYFK EDNIQTTLDD
LHLDFKRANG YSELEISQKR SSLENVMKPD TLVEHENRIR AQGFSQFSVW FQCFNFASMV
AIK
|
|---|
| |