| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2292 |
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| Symbol | |
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| ID | 5662685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2777679 |
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| End bp | 2780669 |
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| Gene Length | 2991 bp |
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| Protein Length | 996 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236902 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001502147 |
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| Protein GI | 157962113 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.359133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTTA GGCGACATTC TGTTGAGTTC GGTTTTGTGC AAGGGATCAT ATTCTGTAAT
GGTGCCAAGC TTTGCGAGCA GGGGTTAACC ATAAACGGTA AGCTTCATCC TTACCCGCTG
TTCAATCAAA CCGTTGAAGT GCGTGAAGGC TGGTTTACCC AAACATTAGT TTGGGGAGAT
AAGCGTTTTA GCTTTTTCCG CTTTATCGAC AGTAAACCTC TGTTTAAGTA CGCTCTGAGT
AACCATGTGC TACACAGCAA AGCGGCGCTA CAAGTCAGCT ATGATGATCT ACTGGCAGAT
ATAATGCGTT TTGACAATCG CTTTGGTCTA CATAAGCGAT ATTTACGTGA TTCAGATACA
AACCAGTTAC AGCATGAGTT TCAAGATTCA TTGGCGGTAT TTAACCGTGT CGAGCATTTT
AGCCAGTTAG GTTTTGACAC CAGTCAGTTT AACTGCAGAC TCGCAAAGTT CATTAAGCAG
CCCGAGGCGT TTACCACAAA ATATAACCAG TGGTGGCAGG AAAAGCAGCT AGATGCGCAT
CAGCAACTGT TTGACTCTAT AGAGGCAAAC CCATTAACGC CATTACAGCG TCAAGCCTGT
GTTATAGATG AGAACAACAC CTTAGTGATT GCGGGGGCGG GCACAGGTAA AACCAGCACC
ATGGCGGCAA AGGCCGCATA CTTGGTTAAT CAAGGTTTGG CGCGGCCGGA AGAGATCTTG
ATGCTAGCCT ACGGCAGAGA TGCCAGAGTC GAACTTGAGC AACGAATAAG TACCATAGCT
GGAGTTTCTA CGCACGGAGA TGGGACATTA GCTGGGGTTA AAGTCAGTAC CTTTCATGCC
TTAGGTAAGG AGATCATCCA ATACTACTTA AATCGCTCGA CCCAAGTGTC TGTACTGGCG
AGTGATGATA AGCGTCTGAC GCAATTTGTC GATCTACAGA TTGACGACAT TGTTGCCGAT
CCACAGATGG CCGATCCCGT TGCCGATTAT TTTGGCCGTT ATCTGTACCC TCAAGTGAAC
GAGTTGGATT TTAACAGCCA AGGCCAGTAT CGCGCCTATC TGAAAAATAA CGAGATCCGT
GCGTTATCGG GCGATCTAGT TAAGAGCTTT CAAGAGCTAA CCATCTGTAA TTACCTTTAT
ACCCACGGTA TCGAGTTCGA GTATGAGCCT AAATATCGCT CTCAAGAGAG CCTTGAGATC
ACAGAGCCAG GAAAGAGCGT CTATCAACCT GATTTCTATA TTCCTGTACT CGATGCCTAT
CTAGAGCATT TTGGGCTGGA TAAACAGGGC AATACACGTC CAGATATCGA TAAAGCAGCG
TACCAACAAA GCCGTGAGTG GAAGATTTCG CTACATAAGC GTCATAACAC CTGCCTGTTG
CAAACCTTTA GCTGGCAGGC CGAAAAGGGC GGATTAGAGC AGGCTCTAGA GGCGCTATTG
TGTGGACGCT GCGGCGAGCT AGGCCTTGAA CAGAGTCAGC TTTTTAAGCC TATCTCTCCG
CAAGAGGTAT TTGCTCAGGT TAAACACTTA GGCGTGTATC GTAATGTGAG TCGCTTGATG
TCGAGCTTTT TGGGGCTGTT TAAGTCTTCA AGCTATACCT TAGCCATGCT TGAGTCGTTA
ACCATGACTG CAGGTTCAAA CAAGAAGATT GCGACTTATA ACCAACTCAG ATGGAAGGCG
TTCTTACACC TCTTTAGGTG GGTATATGAC CGTTATGACA AGCAACTTAA ATTACTTAAT
ACTTTAGATT TTTCTGACAT GATCGCCGAA GCGCTGAAGA TAACCCAAGC CAAGGATTTT
CATCAGAAAA CCGCTGAGCG CTTTCGATAT AAATACATCA TGGTTGATGA GTTTCAGGAT
ATTTCGCCAG AGCGCGCCAA GTTAGTGACA GAGCTGCGGG ACTCAAGCCC AGGATGTGCC
CTGTTTTGTG TGGGAGATGA CTGGCAGGCG ATTTATCGTT TTACCGGTAG CGATCTCGGT
TTAACCACTC AGTTTAGTGA AACCTTCGGC GCGACAGCAA CTGTTATGCT TGACAAGACC
TTCAGATTTA ACGACAGAAT CGAGAAGGTG GCTTCACAAT TTATTCAGGC AAACCCTGCC
CAGTTAAAGA AGCGCCTTAC GACCCATAGC CACAGCGAGA ATCCACAAGT TTGCTTGCTT
ATTAATAATA AAGAGGCTGC AGTCGCGCAG GCTTTTGACA GTATCTATGA GGTCACAAGC
CATATAAAGA AACCTAAGCG CGCGACGGTG ATGTTAATCG GCCGCTTTAA CGCGTCGCTA
AAAGAGCTGA GTCGTTGGCA AAAGAGTTAT CCGCAGTTTG AGATCTCAGG TTTTTCTGCC
CATGCTTCTA AAGGTAAGCA AGCCGACTTT GTTATCGTGC TCGATGTGAA TGACGACAAG
TATGGTTTCC CATGCAAAAT CGATAGCGAT CCTATCTTAG AAGTCTTGTT ACCAAAGCTT
GATAGTTACG CCGATACCGA GGAGCGACGC TTATTTTACG TCGCATTGTC ACGAGCCAAA
CAAACGGTAT TTGTTCAGGC TGAATTAGGT AAAGAGTCTG TATTTGTTAA AGAGCTAAGG
GGCTTTACAG CCGATATACG TGTTTACCTT AGCGATCTTG CTCCCCTATA TCACGAGCAA
CTTTGTTGCC CTGAGTGTAA CGAGGGCAAA CTCATCCCAA GAGAGGGTCG TTATGGCTTG
TTTTACACTT GCTCCTTAGG GCAAGACTAT TGCGATACTA AGCTTGAGGC ATGCCGAGTC
TGTAATAGCG CCCCTATGCT TAGTAACGAA ACTAAGCACT TCTGCAGCTC TGCAAAATGC
GGCCATAAGA TCCAAGTCTG TCCAGAGTGT ATTTCGGGTA AATTAGTTAA GCGTACCAAC
AGTCGTACGG GCAAGAGCTT TCTAGCTTGT AGTTCACATA AAAAAGGTGT GGCCGAAAGC
TGTCAGTACA CTTGCAATGC TCCGGATGAA CCAAAGGAAA CGGCGGCTTA G
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| Protein sequence | MELRRHSVEF GFVQGIIFCN GAKLCEQGLT INGKLHPYPL FNQTVEVREG WFTQTLVWGD
KRFSFFRFID SKPLFKYALS NHVLHSKAAL QVSYDDLLAD IMRFDNRFGL HKRYLRDSDT
NQLQHEFQDS LAVFNRVEHF SQLGFDTSQF NCRLAKFIKQ PEAFTTKYNQ WWQEKQLDAH
QQLFDSIEAN PLTPLQRQAC VIDENNTLVI AGAGTGKTST MAAKAAYLVN QGLARPEEIL
MLAYGRDARV ELEQRISTIA GVSTHGDGTL AGVKVSTFHA LGKEIIQYYL NRSTQVSVLA
SDDKRLTQFV DLQIDDIVAD PQMADPVADY FGRYLYPQVN ELDFNSQGQY RAYLKNNEIR
ALSGDLVKSF QELTICNYLY THGIEFEYEP KYRSQESLEI TEPGKSVYQP DFYIPVLDAY
LEHFGLDKQG NTRPDIDKAA YQQSREWKIS LHKRHNTCLL QTFSWQAEKG GLEQALEALL
CGRCGELGLE QSQLFKPISP QEVFAQVKHL GVYRNVSRLM SSFLGLFKSS SYTLAMLESL
TMTAGSNKKI ATYNQLRWKA FLHLFRWVYD RYDKQLKLLN TLDFSDMIAE ALKITQAKDF
HQKTAERFRY KYIMVDEFQD ISPERAKLVT ELRDSSPGCA LFCVGDDWQA IYRFTGSDLG
LTTQFSETFG ATATVMLDKT FRFNDRIEKV ASQFIQANPA QLKKRLTTHS HSENPQVCLL
INNKEAAVAQ AFDSIYEVTS HIKKPKRATV MLIGRFNASL KELSRWQKSY PQFEISGFSA
HASKGKQADF VIVLDVNDDK YGFPCKIDSD PILEVLLPKL DSYADTEERR LFYVALSRAK
QTVFVQAELG KESVFVKELR GFTADIRVYL SDLAPLYHEQ LCCPECNEGK LIPREGRYGL
FYTCSLGQDY CDTKLEACRV CNSAPMLSNE TKHFCSSAKC GHKIQVCPEC ISGKLVKRTN
SRTGKSFLAC SSHKKGVAES CQYTCNAPDE PKETAA
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