| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2281 |
|---|
| Symbol | |
|---|
| ID | 5662674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2763350 |
|---|
| End bp | 2763874 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641236891 |
|---|
| Product | YdaE |
|---|
| Protein accession | YP_001502136 |
|---|
| Protein GI | 157962102 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3822] ABC-type sugar transport system, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0955109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAACA TCCGTGAACA GATCAAACAG CTTGTAAACC TTTCAGGAAT TTTTCTCACT
AAGCACGAGA TTGAAAATAT TGAGATTACA GATTTTGGTT TGAATAACTT TAATCACGCC
GGATTAATCG TTCATACCTA TATCAATACA GAGCGATGCT GCGCTAAAGA GCTCATCATG
CTACCGCACC AGATCTGCCC TGAGCATGTT CACCCAAGTA TTGGAACACA ACAAGGTAAA
GAAGAGACCT TTCGCTGTCG ATTTGGAAAA GTGAGCGTCT TTATTGAAGG AAGTGTCACC
CAAAAACCTA CAGTAGATCT ACCAAAAGAC ACCGAAAATT ACACAGTGTT TCACGAGGTG
ATATTAGAGA GAGGCGAACA GTTAACCTTA GCTCCCAATT CTAAGCATTG GTTTAAGGCT
CATAGTGAAG GAGCTGTCGT TTCTGAGTTT TCAACGACTT CAAACGATGA CGCGGATCTA
TTTACTAATA AAGCAATTAA CCGATCAAGT CGACTCAGTT TATAA
|
|---|
| Protein sequence | MVNIREQIKQ LVNLSGIFLT KHEIENIEIT DFGLNNFNHA GLIVHTYINT ERCCAKELIM
LPHQICPEHV HPSIGTQQGK EETFRCRFGK VSVFIEGSVT QKPTVDLPKD TENYTVFHEV
ILERGEQLTL APNSKHWFKA HSEGAVVSEF STTSNDDADL FTNKAINRSS RLSL
|
|---|
| |