Gene Spea_2272 details

Gene Information

• Locus tag: Spea_2272
• ID: 5662665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 2749502
• End bp: 2751547
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641236876
• Product: pentapeptide repeat-containing protein
• Protein accession: YP_001502127
• Protein GI: 157962093
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGACTA TCAATGATTA CCGCAGCAAG TTTAACGCGT TGTTAGCGTT AACATTTTCT 
CTCACCTTTG TCACTGCTTG TGATAGCAAC GACAATGAGA CTCAAATACA ATCAGGCCTT 
TTAACCGAAA AGGACTTTGC CAATAATAGT CGTTTACGAG CCAGCCCCGA ACAAGGTACC 
GTTGCTTTAT TTCTTGAGCC ACCGTCGGCA ACGGTAGAAG ATGACTCTAA TGGCGAGACA 
GGCTCTGATC TCATACCTTA CCAATATTCG CGTCCCCTCA AGCATACATT TTGCTATGAA 
GATGGTAACA GCAATTCAAA TCACTCTATG GTGCTTAATA ATAGCAGTGG CGAGGAAGTG 
CTTAGCATTA CAGCCAATGA TGAGTGCGTC TCGGCCGTCA TACCTGCGGG GGAGTTTCAA 
CTAGTACTGA CCCACGGTCA GCATGTAGAT AGCACAGATA CGACCTTCTT AGTGACGACG 
CCAGATAGTG GTTCGCAGCC AGAAGCAAAT AGCGTTAATT ATTCGATTGT TTCCAAACTA 
CTGAGTACCA TCGGTAATGT CCTGATAAGT CCTGCTTATG CCGATACTAC AGATGACAAT 
GTGACTACGC TTATTTCCAC CAACGCATGC AAGAATTGTG ATTTGTCAGG CGCAGACCTG 
GATAATGCAA CACTCACATT TGCAGATCTT TCCGGCGCGG ATTTAACTGA TGCCATATTA 
ACCAATGTCG ACCTTTTCGA ATCAACGCTT ACCGGAACCA ATTTTAGTGG CGCCGATATG 
AGCAAGGGTG ACTTTCGTGG TTCGGAAATG ACCTATGCAG ATCTTAGTAA TGCCAATCTG 
AGTGGGGCTT ATTTTTCCAG CGCACAATTA TCTCCAGCAG ACCTTGATAA TGCGACCGTC 
ACGGATACAG ATTTTGATAA CGCTAATCTT GTTGGCGCGA CATGGATAGA TGGAGGCATT 
TGCGATATCA CCTCTGTTGG TTTTTGTAAT TCAACAGCCG TTGCCGAGTC TGACCCATGC 
GATTCGGTTA AGCAGGATGT TACCGATGAT GGCAACACCG TCTATAAATG TTTATTGCCA 
GCCGTTGATA AAGAAGTTTG TAGCACCGAG TATGGTGGAG TTGATGGCGG CACGCCAATA 
ACTAGCTGTG AAGCAATAGA TGCCTCAGAT CTGGTTACCT CTGTTAATCT GGTTGATATC 
TTCAGCCAGG TTAGCGCATC TTTTGATACC ACTCTGGACA ACGATACGCC TATGGCCATT 
TTAGCTTGGG GAGGAGAAGG TGGCATTGGT TCTAGTGGTG GGCTCTGGAC CTCTGGTGGT 
GATGGTGGTA AGAGTGGTTT TGCCTCGACA GTCACGACGT TATCTCATTT CCTAGACGAT 
TATGGGCAAA CATCATTCAA CTTCTTCATC GGTGAAAATG GCACACTGAG TAATATCGAT 
GGTGACGGTG GCTCTTCGAC ACTGGTTATG ATTGCAGAAA CTAGCCCAGC TTCACTTGAA 
GACGATGTCA TACTTATTGC CGGCGGTGGT GGAGGTGGTG ACTCGTCTGG ATGGCTGAAC 
GATGGCACAG ATGGTGGTGC TGGTGGCGTT GCAGCCTCAT CAATCATAGG CCAAGGAACC 
ATTGGCGTAG GCCAAGCCAT TATTGATGTT GCAGACGGTG GTAGCACCGA TGAATGGGGC 
AATGGTGGAA ATGGCGCCAA TGACGGCAAA GATGGTATTG GTGGCCAAGG CGGACAAGGA 
TTTTTAGGCG CTAATAGTGA GTGGGTAAAT GGCGACCCTG GGGTCGGTTC AAACGGCAGA 
GGCGGCAATG CAGATGATAG CTTTAGTGCT TCTGGCGGCG GTGGCGGCGG TGGTGGTTAT 
GGAGGCGGTG GTGCCGGCGA TGATGGAGCC GGAGCTGGTG GCGGAAGCTG GTCGGTCATC 
CCATCTACGA CCTGTAATAG TGCGCCCACT CAAGATACGG CACCTTCGAG CCCAGGCACA 
TCAGGTGATG ACTTTGGCAG TAAAGATGGC GCTATTGAAG TTTGGATATT TCCAAAGGGC 
TGTTAA 

 

Protein sequence

MQTINDYRSK FNALLALTFS LTFVTACDSN DNETQIQSGL LTEKDFANNS RLRASPEQGT 
VALFLEPPSA TVEDDSNGET GSDLIPYQYS RPLKHTFCYE DGNSNSNHSM VLNNSSGEEV 
LSITANDECV SAVIPAGEFQ LVLTHGQHVD STDTTFLVTT PDSGSQPEAN SVNYSIVSKL 
LSTIGNVLIS PAYADTTDDN VTTLISTNAC KNCDLSGADL DNATLTFADL SGADLTDAIL 
TNVDLFESTL TGTNFSGADM SKGDFRGSEM TYADLSNANL SGAYFSSAQL SPADLDNATV 
TDTDFDNANL VGATWIDGGI CDITSVGFCN STAVAESDPC DSVKQDVTDD GNTVYKCLLP 
AVDKEVCSTE YGGVDGGTPI TSCEAIDASD LVTSVNLVDI FSQVSASFDT TLDNDTPMAI 
LAWGGEGGIG SSGGLWTSGG DGGKSGFAST VTTLSHFLDD YGQTSFNFFI GENGTLSNID 
GDGGSSTLVM IAETSPASLE DDVILIAGGG GGGDSSGWLN DGTDGGAGGV AASSIIGQGT 
IGVGQAIIDV ADGGSTDEWG NGGNGANDGK DGIGGQGGQG FLGANSEWVN GDPGVGSNGR 
GGNADDSFSA SGGGGGGGGY GGGGAGDDGA GAGGGSWSVI PSTTCNSAPT QDTAPSSPGT 
SGDDFGSKDG AIEVWIFPKG C