| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2236 |
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| Symbol | |
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| ID | 5662629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2709460 |
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| End bp | 2710143 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641236839 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001502091 |
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| Protein GI | 157962057 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000435819 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACACA TTTTGCTGGT GGATAATGGT TCCACTGTTA TAGGGAAATT GGCTCAGCTT
CTTGCAGGCA ATGATTTTAC TGTAACCCTC GCAAACAACT TTGATGAACA ACGCCTTAAA
GAGGCGTCTA TCTATGCCGA TCTAATTTTA TTATTCCTTA ATATGTCAGA TATAACTGAT
ATTGAGCATT GTCTGCTAAA GCAAACGAAG ACACCGAAAA TGATATTCTC GGATACAGAT
TCTGAAGAAG ACAGGATCCA TGCTTATGAG CTTGGTGCCG ATGACTATTT AATTCAACCT
TGTAGTCAGC GTGAGCTATT GGTTCGGATA CAGACCGTGG GACGCAGATT AGAAAGCAAA
AACAACTGGC CTGAGCTAAA AAGTGTTAAA CCTGAAGATA TTGACTTTGA TGATAGGCTA
AACACTATTT CAATTTATAA GAAATCGGTG GTTTTCACTC AGACTGAGTT TAGGCTGTTT
AAATATTTGT TCGAGAGAAA AGGTCAAGTG GTAACTAAGC AGGAACTACA ACTTCGTATA
CTGGAGAAAG AGCTCGGAAA ATTTGATCGT AATCTGGATA TGCATATCAG TAATACCCGC
CGTAAGCTGT TTGAGATGCA ATTACCTAAG ACTCTAATTA ACACAGTTAG GGGAAAGGGC
TACAGTTTTT CTACGATAAG CTAA
|
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| Protein sequence | MKHILLVDNG STVIGKLAQL LAGNDFTVTL ANNFDEQRLK EASIYADLIL LFLNMSDITD
IEHCLLKQTK TPKMIFSDTD SEEDRIHAYE LGADDYLIQP CSQRELLVRI QTVGRRLESK
NNWPELKSVK PEDIDFDDRL NTISIYKKSV VFTQTEFRLF KYLFERKGQV VTKQELQLRI
LEKELGKFDR NLDMHISNTR RKLFEMQLPK TLINTVRGKG YSFSTIS
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