| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2192 |
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| Symbol | |
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| ID | 5662585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2658015 |
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| End bp | 2659241 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236795 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001502047 |
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| Protein GI | 157962013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGTC ATCTCAACAG CACAGCATTC AAATTAACAC TGCTTTTTTC ATCAGTGGCA
CTCATTACTG GCTGCGAAAA AGAACCAGTG CAAATCACCC CTAAATTAGT TGTTGTTGAA
AAGGTATCGA CAGCAACTGT GCCACTTTAT GGCAATTATG TCGGAGTAAC AAAGGCCTCG
TTGGATGTTG AAGTAAGAGC GAGGGTCGAT GGCTTTGTTG AAAACAAAAC TTTTATCGAA
GGCAGTGCCG TCAAAGAAGG GGCACTACTT TATCGTATCG ATAATCGGCC TTATGTCGCT
GTGGTTAATC GTTTAAGTGC TAATGTTGAA TCCCAGCAAT CAGCACTTGA AAAGGCGCAA
CGTGATGTCG AACGTTTAAA GCCCTTGTAT GAGCAAGACG CTGCCAGTCA GTTAGATTTT
GATAATGCGC TGTCGGTTCT ATCGCAAGCA AAATCCAGTG TTGCAGCAAG TAAAGCCGAA
CTTGAAGAGG CAAGGCTTGA ACTCAGTTAT ACCGAGATTC AGTCTCCCAT TAGTGGATTA
GTCAGCCGCT CAGAAGTTGA TATCGGCGCA TTGGTCGGTA GCAGCGGTCA ATCGTTATTA
ACTCGGGTTA AGCAGGTCGA CCCTATTTAT GTCACCTTTA ATATGTCGGC GTTAGATTAT
CTTAATGCGC GCCGACGGAT GACCAGTGAC AAAGAACAAC AAGCCGCTGA ATCAGAAGGT
AAAGCCGTTG AAGGTTTCGT TACAATTACA TTGCCAGATA ACAGTGAGTA CCGGTATTTA
GGTGATGTCG GCTTTACCGA TCCTTCGGTC AACCCTGAAA CTGGGACCTT TCAGGTAAGG
GCTGAACTCC CCAACCCAGA TAAAGAGTTA CTGCCGGGCC AATACACCAA TGTCAGAATT
AAGCTCAGTG AAGTGAGTGG TGCAATCGTT ATCCCGCAAA AAGCCACGCA AGTTGAGCAA
GGTGGCGTCT ATGTGATGAT TGTGCTGCCC AATAATAAAG TTGAACGCCG CTTTATCGTG
ATAAAACATC AAGGTGAAAT GGGCGTAGTA GTACAAAGTG GTTTAAAAGC GGGAGAGTTG
GTCATTGTCG AAGGCATGCA CCGTGTCCGT CATGGGCAAC TGGCAGAGCC GTTAACTGCC
GAGCAGTATA ATAAGAAAGA GGATGTAAAA CAAAAAGCGC AAGCATTGAA GCAACAAAAG
CTTGAGCAGG AACAGGGGGA TAACTAA
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| Protein sequence | MPSHLNSTAF KLTLLFSSVA LITGCEKEPV QITPKLVVVE KVSTATVPLY GNYVGVTKAS
LDVEVRARVD GFVENKTFIE GSAVKEGALL YRIDNRPYVA VVNRLSANVE SQQSALEKAQ
RDVERLKPLY EQDAASQLDF DNALSVLSQA KSSVAASKAE LEEARLELSY TEIQSPISGL
VSRSEVDIGA LVGSSGQSLL TRVKQVDPIY VTFNMSALDY LNARRRMTSD KEQQAAESEG
KAVEGFVTIT LPDNSEYRYL GDVGFTDPSV NPETGTFQVR AELPNPDKEL LPGQYTNVRI
KLSEVSGAIV IPQKATQVEQ GGVYVMIVLP NNKVERRFIV IKHQGEMGVV VQSGLKAGEL
VIVEGMHRVR HGQLAEPLTA EQYNKKEDVK QKAQALKQQK LEQEQGDN
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