Gene Spea_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2184 
Symbol 
ID5662577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2647701 
End bp2648342 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID641236787 
Producthypothetical protein 
Protein accessionYP_001502039 
Protein GI157962005 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00487522 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCTA ATCAGATTAA TACTCAAGAA GAGCCTTTAA CGCTTTATTT TATCTATGAC 
TCTCACTGCC CGTGGAGCTA TGCTGCCACG CCTGTTGTTG AAGAACTGCT TAATGCTTTC 
GACTATTCAG ATGTCCATTT ACTGCATTGC GCACATTTCA ACGGTTCTGA CGCACCTAAA 
AAGGCACAGG TTGAGCAGGT TAGTGCACTC AGCAATGTGG AATTTAGTGA TGCTTATTCT 
AAGCAAGTAA GTAATAAGGT GTCTTCAGTT AAGACGGCGA ACTTTATGTC TTGGGTGCAG 
TCTAAGCAAG CTGATAAAGA GTTTGAGTTC CTAAAAGTAC TTCAACATCA ACACTTTGTT 
GAAGCCAACC CGTTAAATTC GAGAGACGAT TTCGACAAGA TAATTAATCA ATATAAATTA 
TCGCCGTCAA ATAAGGTGTT TAAAGATGCA CTAAGCCATG AGGCAGAAAG TGTGTTAGCG 
GGTATTGCAG AGATTGGCGA GGCTATTGGC ACCAATGCAT TCCCAGTATT AGTGATGACA 
TCAGGCGATC AGGCGATCTT TATCGATCAC TCGCAACATT TGGCATCGCC AAAAGATGTG 
GTGGAAATGG TTCGTGCTGA GCTTGCTGAT TTAAGCGATT AG
 
Protein sequence
MPANQINTQE EPLTLYFIYD SHCPWSYAAT PVVEELLNAF DYSDVHLLHC AHFNGSDAPK 
KAQVEQVSAL SNVEFSDAYS KQVSNKVSSV KTANFMSWVQ SKQADKEFEF LKVLQHQHFV 
EANPLNSRDD FDKIINQYKL SPSNKVFKDA LSHEAESVLA GIAEIGEAIG TNAFPVLVMT 
SGDQAIFIDH SQHLASPKDV VEMVRAELAD LSD