Gene Spea_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2171 
Symbol 
ID5662564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2627940 
End bp2628788 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content45% 
IMG OID641236774 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001502026 
Protein GI157961992 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAA TTTTAGAAAA AGCACAGAAA CTATTCTTGT CAGACAATGA CGCAAATGTA 
CTCACAGGCC ATCAATTTGA AACGGTTAAT TATTTAGTCA AAGACAAAAT AGGCATTATC
GAGCTAAATC GACCCAATAA AATGAATGCT TTCAATCAAA CCATGCGCAG CGAGCTGCAG
GCTGCGATAG AAATGGCAGA CAATAATGAC GATTTAAGAG TGATTATGAT CCGTGGTGCT
GGTGATCACT TCTCTTCGGG CGCGGACTTG AAAGAGCTTG TTGGTGCCAA GCACGGTATA
GAGGCACAGA TCCTTAATGA ATATAAGCCA TTTTTATCAC GTATTGCCCA GTCAAAAAAG
ATTTATATGG CAGTTGTACA AGGCGCCGCA GCAGGGATAG GCGGTTCGTT AGCCTTAAAT
TGTGACTTAG TCGTTATGGC TGAAAGCGCC TGCCTTTTTC AGGCTTTTGC CGCTATTGGA
TTAGTGCCTG ATGGAGGCGC AAGCTGGCAT TTAGTCAATA AACTGGGCTA CAAGAAAGCG
TTCGAACTTT GCGTCGAGGC CGACAAGCTC ACGGCGCTGG AGTGTCTGAG CAGCGGCTTG
GTCAATCGTA TTTCTGATGA TGCAAGTGTG CAAGGTGATG CACTTGTTTG GGCACAAAAA
TTGGCCACCG GAGCACCACT ATCACAGCAG TACTTAAAGC GATTATTGCA ACAAGCTCAG
CGAGGGAGCT TACACGACAC CATTCGCCAA GAGGCGCTGT ATCAGCAGTT CTGCTTCAAC
AGTGACGATT TTAAAGAAGG TGTGAATGCC TTTTTTGAAA AACGCGATGC AACCTTTACT
GGTAAGTAG
 
Protein sequence
MSVILEKAQK LFLSDNDANV LTGHQFETVN YLVKDKIGII ELNRPNKMNA FNQTMRSELQ 
AAIEMADNND DLRVIMIRGA GDHFSSGADL KELVGAKHGI EAQILNEYKP FLSRIAQSKK
IYMAVVQGAA AGIGGSLALN CDLVVMAESA CLFQAFAAIG LVPDGGASWH LVNKLGYKKA
FELCVEADKL TALECLSSGL VNRISDDASV QGDALVWAQK LATGAPLSQQ YLKRLLQQAQ
RGSLHDTIRQ EALYQQFCFN SDDFKEGVNA FFEKRDATFT GK