| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2116 |
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| Symbol | |
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| ID | 5662509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2560582 |
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| End bp | 2561604 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236719 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_001501971 |
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| Protein GI | 157961937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTTAA CTGGAAAAAA AGTTATCTTA CACGATATGT CATTAAGAGA CGGCATGCAT
GCTCGCCAAC ACCAAATTAG TTTGAAAGAG ATGGTTGATG TTGCGACAGG ACTCGATGCT
GCAGGCGTAC CTTTAATCGA AGTGACCCAC GGTGATGGCC TTGGCGGTGC CTCACTCAAT
TACGGATTTC CTGCGCACAC CGATGAAGAA TACTTAAGCG CGGTGATCCC TAAAATGAAG
CAGGCAAAAG TATCTGCTTT GTTGTTACCT GGGATAGGTA CGGGTGATCA TTTGCGCATG
GCCCATGACC TCGGGGTTAA TACTATCCGT GTTGCAACCC ATTGTACTGA GGCGGATGTA
TCTGGGCAGC ATATTTCGTT ATCACGTGAA TTAGGCCTAG ATACAGTAGG GTTTCTTATG
ATGGCTCATA TGGTTAGCCC TGATAAATTA CTTGAGCAAG CCAAACTGAT GGAGTCCTAC
GGTGCGAACT GTATTTACTG CACCGACTCT GCAGGTTATA TGCTGCCAGG AGACGTAACT
TCGCATATTG AGCGCTTACG CGGAGAGCTA AAAAGCGATA CCCAAATTGG TTTTCATGGC
CACCATAATA TGGGAATGAG TATCGCGAAC TCCCTAGCTG CAATCCAAGC TGGTGCTGAG
CGAATAGATG GCTCAGTCGC AGGTTTAGGA GCTGGAGCAG GCAACACCCC CCTAGAGGTA
TTCGTTGCCG TTCTTGAGCG TATGCAAGTA AGCCACGGGA TTAATTTGTA TGACATTATG
GACGTAGCTG AAGATCTGGT TACCCCGATG ATGGATCAGC CTATAAGAAT CGACAGAGAT
GCACTGACGT TAGGCTATGC AGGCGTTTAC TCATCATTCT TATTATTTGC TCAGAGAGCC
GAGAAAAAAC ATGGCATTCC AGCGAGAGAT ATACTGCTCG AACTGGGTAG GCGTGGCACT
GTTGGCGGCC AAGAAGATAT GATTGACGAC ACGGCAATGA ATATGGCCAG AGAACGCGCA
TAA
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| Protein sequence | MNLTGKKVIL HDMSLRDGMH ARQHQISLKE MVDVATGLDA AGVPLIEVTH GDGLGGASLN
YGFPAHTDEE YLSAVIPKMK QAKVSALLLP GIGTGDHLRM AHDLGVNTIR VATHCTEADV
SGQHISLSRE LGLDTVGFLM MAHMVSPDKL LEQAKLMESY GANCIYCTDS AGYMLPGDVT
SHIERLRGEL KSDTQIGFHG HHNMGMSIAN SLAAIQAGAE RIDGSVAGLG AGAGNTPLEV
FVAVLERMQV SHGINLYDIM DVAEDLVTPM MDQPIRIDRD ALTLGYAGVY SSFLLFAQRA
EKKHGIPARD ILLELGRRGT VGGQEDMIDD TAMNMARERA
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