Gene Spea_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2029 
Symbol 
ID5662422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2454973 
End bp2456736 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content42% 
IMG OID641236624 
Producthypothetical protein 
Protein accessionYP_001501884 
Protein GI157961850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA TTAGATTTGA ATTTAATTGT ACCCGTGAAG TCCCTTTTTA CGCACACCTT 
TGCAATCAAT ACCTGCAAAA CGAACAGTAT GATGTAACCA TAGGAAAAAA CGATAACCTT
TATTATATCG AGGCTAAAGG TGAACAGAGT CAACTTGAAG CTCTCGCCGA CGCTATAGCT
AATGATTTCT TAATTTCTAC TTGGCTAGTA AAGCCACAGA TCAGTGCTAT CGAAACGCCA
TGTGGTACAA AAAAACTTCT CGAAACAACT GAGCTAGAAC TTGAGTATTG TCAGCATTGC
CAACCCCAGC TTGGTGATAA TCAAGCTGCC CACTTTGGAG AAATAGGATT TAACTGCCCT
TGCTGCATGG CTCACACCCG CATATCTGCC GATGAGCAAG CGGTTTCCTT AGCCGATGCC
AGAGCGCTAG TGAAAAAGCT CGATAAATTA GGCTCGATAG AGCTCCCACA AGGGAATAAT
GGCTTCGGTA CCATTATCAG TTTCCAACCC ATTGAAAACC AATCCCTTGA AGCTCGTCAG
CAATTGGTGA TCTGTAATCC AAATAATTTG CACGCACACT TCTGTGTTAA CGATAGCCAA
ATACTGGCGC TTTCGAGTAT TGAAAAGCCT TTCATTAAAG CGCGACCAAT CAGTAGCCAT
ACTCGACTCA AGCAGCCCAT ATATGAGCTC TGTTTCGCCA AGTCGCGCTT ATTACTGGTG
ATCTGCGAAA TCATGCGCCA ACAAGGCATT GATTACGTCT ATATTGCTAA CAGTCAAAAC
CCTAAGATTG CTATGGTTGA GGCTAAATGG TCATTGATTG ATACGCCGTC ATCGGCCCAA
AAGCTCTTCA TCAATGCGGT TCGTCAACCT TTACACGATG ATGCTCAAGC AGGAAACTAC
CAAGCGCACT GGACTGAAAA ACATATTGAG ATCACCGCAG ATAAGCACAG TGTCAATCAA
GGCAATGCTA TAACACCTAT CAATAATGCC GCAAATTGTG CACTGCATGC TGCAACGATT
AATGATAAGA AACCGAAGAA CATCGCAGCC TTATATTTCA GTAATACAAG TAAGACTCAG
ATAGTCACTT TAGATGGCAA ACAGCAACTT GAGCTATTTT TCGAGTTTCC AAGTTTACCC
GATAATGGCT ACGACATAGT GCATCATCTT GAGCTCTCGC CGCAGAAAAC ACTATTGGAT
AAATTTAAAA CTCTTTATCC AGATGATTAC TTAAAACTTC TCTCCTTAAA GCTTACCCAA
CCAACTGATA ATATTGAAAC TTTATGGGCC ATTGCAGCAA TATTTCTTGG CGCAACAAGT
CAAACAAACC AAACGAGGGC ATTAAGCAAA ACGGAGCTTT GCGATTTTGT AGTCGCCCGC
GCCATGTGTC ATAAAGGAGC CAATGCCCCC CGGGTCGATT TCCCATTAAC TCGAGGTGAA
GCATTTAGAA GCCTTAATTG GTGCAAGACT TTAGGCAGTA TTATCAGCTT TAGACTCGCA
GAAGAAGAAA ACGTCGACAA ACTCGCCTTT GGTATGCATG ACTCTTTTGC TGATTATATT
TGTAACTGGA TTGAGCATCT GGATCAAAAT ATCAATATTA AGTCCGTTGT GATCGCCGGT
AATAGTTTTG CTAATGAGGT TCTAGCACAA AGAGTCGTCC TGCGTCTTGG GAAGAACTTT
AGCCTCAACA CTAATCCACA GATGGATCTT GATGGGCTGA ATATTGCAGT AGGTGCATTG
TATCTTAAGC AGCGTAGACA CTAA
 
Protein sequence
MKNIRFEFNC TREVPFYAHL CNQYLQNEQY DVTIGKNDNL YYIEAKGEQS QLEALADAIA 
NDFLISTWLV KPQISAIETP CGTKKLLETT ELELEYCQHC QPQLGDNQAA HFGEIGFNCP
CCMAHTRISA DEQAVSLADA RALVKKLDKL GSIELPQGNN GFGTIISFQP IENQSLEARQ
QLVICNPNNL HAHFCVNDSQ ILALSSIEKP FIKARPISSH TRLKQPIYEL CFAKSRLLLV
ICEIMRQQGI DYVYIANSQN PKIAMVEAKW SLIDTPSSAQ KLFINAVRQP LHDDAQAGNY
QAHWTEKHIE ITADKHSVNQ GNAITPINNA ANCALHAATI NDKKPKNIAA LYFSNTSKTQ
IVTLDGKQQL ELFFEFPSLP DNGYDIVHHL ELSPQKTLLD KFKTLYPDDY LKLLSLKLTQ
PTDNIETLWA IAAIFLGATS QTNQTRALSK TELCDFVVAR AMCHKGANAP RVDFPLTRGE
AFRSLNWCKT LGSIISFRLA EEENVDKLAF GMHDSFADYI CNWIEHLDQN INIKSVVIAG
NSFANEVLAQ RVVLRLGKNF SLNTNPQMDL DGLNIAVGAL YLKQRRH