Gene Spea_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2009 
Symbol 
ID5662402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2435098 
End bp2435499 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content37% 
IMG OID641236604 
Producttransposase and inactivated derivative 
Protein accessionYP_001501864 
Protein GI157961830 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.639422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGTT TTTGCCATGA TAATACCATG TTAGCCAAGC TTATTAGAAA AGAGAAGAAT 
GCAAGGATGA AGGTTAAGTT ATTGGCGGTT TTACATTTTC AAGATGGGAA GTCAAGGTAT
CAAATTGCCG ACTTTCTCAA AGTTAGCCGC ACCAGTGTCA ACCGTTGGAT TAGCCTCTAT
TTAGCAAGTG GATTAGAAGG ATTAAAAGAG AAACCCCATC GTGGAAGACC CAGCATTCTC
AATCAAGAAC AGCTGGTTCA GTTGCAAAAT CATATTGAAA ATAAGAGTTA TCATGGAGAA
AAAGTAAAAT TAACTGGCGT AGACATTCAG CTCTACATCG AGAAACAGTT TGGCATTAAA
TATGAGATAT CTAGCGTATA TAAATTAATA GAGCGATTTT AG
 
Protein sequence
MDSFCHDNTM LAKLIRKEKN ARMKVKLLAV LHFQDGKSRY QIADFLKVSR TSVNRWISLY 
LASGLEGLKE KPHRGRPSIL NQEQLVQLQN HIENKSYHGE KVKLTGVDIQ LYIEKQFGIK
YEISSVYKLI ERF