| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1940 |
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| Symbol | |
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| ID | 5662334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2354556 |
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| End bp | 2355572 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641236529 |
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| Product | BNR repeat-containing protein |
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| Protein accession | YP_001501797 |
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| Protein GI | 157961763 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.242255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTTA GCATGCTTCG ATTTATCTCA ACATTGAGTA TATTTAGTCT TTTTCAGTCA
TTACCTGTAC TAGCACAAGA GAATAAATTC GAACAACAAA TTCAGCCTCT TGCTGTAAAC
TCATTAGTTT TAGATATCGC AAATAATCAA CAAACCTTGG TTGCCGTCGG TGAACGAGGA
CACGCATTCA TTTATCAAAA CTCTTGGAAA CAGGTTAATA CCCCAACACA AGCCCTACTC
ACTAAGCTCT TTTTTATTGC GCCCGATATA GGTTGGGCTG TGGGCCATGA CGCAACTATC
CTGCATACAA GGGACGGTGG CCAGACTTGG TCAGTTCAAA TGCAGTCTGA AGAAATTGAA
AAGCCTTTAT TAGATATTCT TTTCTTTACT CCGCAACATG GCGTAGCGGT TGGTGCTTAT
GGTCTATTTT ACCGTACCTA TGATGGTGGT AAGACATGGA ATAGTGAATA CCATCAAGAA
CTGCTGTTTG AAGAAGACGT TGCATATTTG GAAGAATTAA AGGCTGAGGA TGAAGCCCTT
TACCTTTCAG AGCGAAGTAC ATTACTACCC CATTTCAACC GCATTATTCA AGCAACTGAT
GGCACACTCA TTATGGTTGG TGAGTTAGGC TTAGTTGCCA CTTCAACTGA TCAAGGCCAA
AACTGGCTAA AACAAGATTT TTTGTATGAA GGTTCTTTAT TCAACGCGAT CATTGTCGAT
GAAACCGCTT TTGTGATGGG ACTGAGGGGC AATGTTTTTA AGTCGGATCT GAGTTTAGTT
AATTGGCAGA AGGTTCATCT TCCCACTGAT TCCACGGTTA ATGCCGGAAT AGGGCTCGAA
GAGGGCGCAT TAAGATTAGT CGGTAATGCC GGTGTTATTA TCGATATATC TGACTCGGGT
AAAAGCCAAC TTGTAGAGCA ACGACAGGGT GAAAACTTAG TCGCTATTGC TAAAGACTCA
GAAGGAAACT TATGGGTTTC TGGTAATAAA GGTCTCATCA AATTAGAACA AAAATAA
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| Protein sequence | MSFSMLRFIS TLSIFSLFQS LPVLAQENKF EQQIQPLAVN SLVLDIANNQ QTLVAVGERG
HAFIYQNSWK QVNTPTQALL TKLFFIAPDI GWAVGHDATI LHTRDGGQTW SVQMQSEEIE
KPLLDILFFT PQHGVAVGAY GLFYRTYDGG KTWNSEYHQE LLFEEDVAYL EELKAEDEAL
YLSERSTLLP HFNRIIQATD GTLIMVGELG LVATSTDQGQ NWLKQDFLYE GSLFNAIIVD
ETAFVMGLRG NVFKSDLSLV NWQKVHLPTD STVNAGIGLE EGALRLVGNA GVIIDISDSG
KSQLVEQRQG ENLVAIAKDS EGNLWVSGNK GLIKLEQK
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