Gene Spea_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1832 
Symbol 
ID5662227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2231316 
End bp2231909 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID641236422 
ProductDoxX family protein 
Protein accessionYP_001501690 
Protein GI157961656 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.174691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTG TTAATTTATA TCAAAAGTTT TTAAGCACGT TAAAGTATGG TGAAGGACTT 
GCGCCACTTG CGCTACGTCT GTATTTAGCC CCTGTATTGA TGCAAGCCGG ATATAATAAA 
CTTTCCCACT TTAGTGACTC CGCAGCTTGG TTTGGTAACC CAGACTGGGG ACTTGGACTA 
CCGTTTCCAG AGGTGATGGT TGCACTTGCC GCTGGTACAG AGTTTTTTGG TGGTGCCTTG 
CTGGTGGTAG GTTTGGCGAC TCGACTCGTC TCAATTCCTT TAGCCTTCAC CATGTTAGTC 
GCAGCTTTTA GTGTACATAT TGAAAATGGC TGGCTGGCGA TTGCTGACTC AAGCTCTTGG 
CTGGCAAATG AGAATGTTCT CGCCTCGGCC GAGAAGTTGC AGCAGGCTAA ACAAATTCTA 
CAAGACAATG GTAACTACGA ATGGTTAACC AGCTCAGGTA ACTTGGTGAT CTTAAATAAT 
GGTATTGAGT TTGCCATTAC GTATTTGTTT ATGCTTTTAG CTCTAGTGTT TATGGGGGGA 
GGACGTTACA CCAGCCTTGA TTACTATATC GCTAGGCGCA ATGATATTGC CTAG
 
Protein sequence
MQFVNLYQKF LSTLKYGEGL APLALRLYLA PVLMQAGYNK LSHFSDSAAW FGNPDWGLGL 
PFPEVMVALA AGTEFFGGAL LVVGLATRLV SIPLAFTMLV AAFSVHIENG WLAIADSSSW 
LANENVLASA EKLQQAKQIL QDNGNYEWLT SSGNLVILNN GIEFAITYLF MLLALVFMGG 
GRYTSLDYYI ARRNDIA