| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1827 |
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| Symbol | |
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| ID | 5662222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2225993 |
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| End bp | 2226382 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236417 |
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| Product | hypothetical protein |
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| Protein accession | YP_001501685 |
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| Protein GI | 157961651 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5633] Predicted periplasmic lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000018447 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGC TTTTATTGGG ACTCGTTACC GCTGTGATGA TTACGGCGTG CGCTCCACAT
ACTGCTGGCG TTATGGCGGG GTCGAATGGG GAGGTGCGTG TAGATAACAA CAGTTTTGGC
AAAGAGGTAC AAGTTAGCAA TATCATGGCG CGTCCCGAAG GTGGTTTTTT ACGTGGTACA
GGCACCATTG CCAGTCAAGT ATCAACCGAC TTAAGATTGC AGTATAAGTT TACCTGGTTT
GATCTCAATG GCATGACTAT TGACGATGAA GGAGTCAGCT GGAAGTCGAT TAAGTTACAC
GGTAAACAGC AGATGCAGGT GAGCGCCGTC GCGCCTAATG CTACAGCCAC TCGTTTCGAA
CTTTATGTTC GCAAAGCATT TTCTAATTAA
|
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| Protein sequence | MKKLLLGLVT AVMITACAPH TAGVMAGSNG EVRVDNNSFG KEVQVSNIMA RPEGGFLRGT
GTIASQVSTD LRLQYKFTWF DLNGMTIDDE GVSWKSIKLH GKQQMQVSAV APNATATRFE
LYVRKAFSN
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