| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1817 |
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| Symbol | |
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| ID | 5662212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2220539 |
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| End bp | 2221174 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236407 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001501675 |
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| Protein GI | 157961641 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.596206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAAG TGATACATTG GGTCGTCGTT ACCCGTTCGC ATCTGTTTGC GGATCTTCTC
AATACTCGAT GGCCACAAGA GTTTTTGGTC AAACTTCATC GGATCTCTCC TGAACACTTT
AATGGTGATC TATTAGAGAG TCGCATTACG ATTATTTTAA TCGATCTTGC AACTGTCGAT
GTTCAAACCG CCTATCAGAT CCAAAAACGG GTTGAAAAAG GTAGCAACAT TGCACGAGTG
GTATTTGTGC ACTTCCCTAA GCAAGTTGAT GCCAAGTTTT TAGTGCAGTC ATCTATTACT
GCTGGTGTGT TTTATTCTGA CGCTTCACTA GAAGCCATTG GAGAAGGCAT GGCAGAGATA
GTAAAAGGTA AAGTTGTTAT TCCTCAGGCC ATTATTGAAG CTAACACCAA TAAAGATCCT
GCCTTAGATA ATGTCGATAC CCTCACTATC CGTGAGCGAG AAGTGCTACA GGTGCTGCGT
AATGGTAGTA CCAATATCGA TATCGCTAAT AGGTTATTTG TCAGCGAAAG CACCATCAAA
ACCCATCTTT ATAGAGCCTT TAGAAAGATT GGAGTCTCTA GCCGAGGACA AGCAATTGCC
TGGGCGCAGA CTAACCTACA TGAAGTGACT CAGTGA
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| Protein sequence | MFKVIHWVVV TRSHLFADLL NTRWPQEFLV KLHRISPEHF NGDLLESRIT IILIDLATVD
VQTAYQIQKR VEKGSNIARV VFVHFPKQVD AKFLVQSSIT AGVFYSDASL EAIGEGMAEI
VKGKVVIPQA IIEANTNKDP ALDNVDTLTI REREVLQVLR NGSTNIDIAN RLFVSESTIK
THLYRAFRKI GVSSRGQAIA WAQTNLHEVT Q
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