| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1813 |
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| Symbol | |
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| ID | 5662208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2215078 |
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| End bp | 2216544 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236403 |
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| Product | nitrite transporter |
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| Protein accession | YP_001501671 |
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| Protein GI | 157961637 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.920075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTC AAGCATTCAA TCTTTTCTCC TTTAGCGGAA AAATGAAAGT CATGCACTTA
AGCTGGATGG CATTTTTTAT CACCTTTATG GTCTGGTTTA ATGCCGCTCC CTTGATGAGT
GTGATAGCGG CTAGCTTAGG CTTAACCCAC TCACAAATTA AAACCTTGTT GATTCTCAAT
GTGGCATTGA CGATCCCAGC AAGGGTGATA ATAGGAATGC TAACTGACCG CTATGGGCCA
AGAAAAGTCT ATTCTCTGCT GCTGGGCTTG TGTGCGATCC CCTGCTTTAT GTTTGCCCTT
GGAACCAGCT TTGAACAGCT TGCCTTAGCA CGGTTTTTAT TGGGGTTTAT TGGTGCAGGT
TTTGTGGTTG GGATCCGTAT GGTGAGTGAA TGGTTTCCAG CAAAAGAGCT CGGGGTTGCA
GAGGGGGTTT ACGCTGGTTG GGGGAATTTT GGCTCCGCAG CGGCGGCATT TACCTTACCA
GCGGTGGCGT TGGCATTTGG TGGTGATGAT GGCTGGCGCT ATGCCGTCGG GTTAACGGGG
GCTATTAGCC TTGTGTTTGC GTTTATCTAT TATGCCAATG TTACAGACAC GCCAAAGGGA
GCTACCTATT TTAAGCCTAA AAAAGCTGGC GCACTGGAAG TCACCAGCAA AAAAGACTTG
CTGTTGCTGG TGGTGATGAA ACTACCTATG TATGCAACTT TGGCTTTACT GGCCTGGAAA
CTTTCTCCCT CCGGTGTAGC TCTGTTATCT GACAATACAG AAAAGGGGAT TTACTTATTA
TTGACAGTGA TTTTAGCTGC GGATCTATTG CAGACTTTTA ATGTCAACAA AGCGGTTTTT
AACGGCAGTA TCCCTGAGTT TGAACGCTAT GAATTTAAGC AAGTCGCGGT GTTAAATGTG
CTTTATTTTA CAACCTTCGG TTCTGAACTC GCAGTGGTGT CTATGCTACC GCTCTATTTC
GCAGAAACAT TCGAATTAGG TATGACACAG GCTGGCATGG TGGCGTCGTC TTACGCTTTT
ATGAACTTAA TGTCTCGACC AGGAGGCGGT TGGTTAAGTG ATCGTTTTGG CCGTAAATCA
ACGCTATTAA TCCTGACTGC CGGGCTGGCA TTAGGTTATT TGGGAGTGGC ACAAATAGAC
AGCAGTTGGG CATTACCGTT GGCGATAATT ATGGTGATGC TGTGTTCATT CTTCGTTCAA
AGTGGAGAAG GCGCAGTCTT TGCGGCAGTG CCGTTAATTA AGCGCCGCTT AACGGGCCAG
ATAGCGGGAA TGACTGGTGC TTATGGTAAT GTTGGTGCGG TGTTTTTCTT AACCGTGTAC
TCGATGGTGG CGACTCAAAC ATTCTTTTAT GTTATTGCGG CTAGTGCACT ATTTGGTTTT
TTGACCCTGT TTTTATTGAC TGAGCCAAAG GGACACATCG CCGAGGTTAA TGAGGACGGA
GAAGTCACAT TAATTAGTGT GAGCTGA
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| Protein sequence | MSSQAFNLFS FSGKMKVMHL SWMAFFITFM VWFNAAPLMS VIAASLGLTH SQIKTLLILN
VALTIPARVI IGMLTDRYGP RKVYSLLLGL CAIPCFMFAL GTSFEQLALA RFLLGFIGAG
FVVGIRMVSE WFPAKELGVA EGVYAGWGNF GSAAAAFTLP AVALAFGGDD GWRYAVGLTG
AISLVFAFIY YANVTDTPKG ATYFKPKKAG ALEVTSKKDL LLLVVMKLPM YATLALLAWK
LSPSGVALLS DNTEKGIYLL LTVILAADLL QTFNVNKAVF NGSIPEFERY EFKQVAVLNV
LYFTTFGSEL AVVSMLPLYF AETFELGMTQ AGMVASSYAF MNLMSRPGGG WLSDRFGRKS
TLLILTAGLA LGYLGVAQID SSWALPLAII MVMLCSFFVQ SGEGAVFAAV PLIKRRLTGQ
IAGMTGAYGN VGAVFFLTVY SMVATQTFFY VIAASALFGF LTLFLLTEPK GHIAEVNEDG
EVTLISVS
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