| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1683 |
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| Symbol | |
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| ID | 5662079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2041544 |
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| End bp | 2042818 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236270 |
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| Product | RDD domain-containing protein |
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| Protein accession | YP_001501542 |
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| Protein GI | 157961508 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0350832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAC AGCAGATAAC TAAACATGAC GATCCTAAGA CATGGGTAAC GCCTTTTGCC
TTCGATCTTG ATCCTAATAT TCTTTATATG CCATTAGCAA GTCCATCCAA ACGCGGCTTA
GCCATGTTGA TTGATGGCCT CTTAGTCGCA GTCTTAGCCG AAAGTGCCGG CTGGATCTTT
ATCCTACTGG TGCTCGGTAC TCTTTTGATC CAAAAGCAGA GTAAAGCAGT GGGTAAGTTG
TTTAAGTGGG GGTTGTACTT GCTGATGCTA ATCGGCTTGA TTTCGGCGTT AGTAGGCTAC
TTTGGTGACG TCACCTCAAA CTTGAAAACA AGTAACGCAG ATAGTGATAG CAATATAGTG
CTACCAGAAA ACGACAAAGG TGGTTTGGCT ACTCTGGCTG AAATAGCGGG TTACGTGCCC
GCAGTTATTG TCGCGAGTCA ATGTGAAGAT TTTGCCTGCG CACAAATCAA TATAGAGAAG
GTAGAGACTG CATTATCGTA CTCAAGCCTC AATGCTGAAG AGCAGAGCAA CATTATTAAT
GAGTTAGTGG TTGAACTGCC ATTAACCGCA GCAGAAAAGC AGCAACTTTA TGTAACAAAA
GAGCCGCTCG CTGCCGTTTC TGTAGAAACT GACATCGAAG CGAGTGCAGA TATAAGCTCT
GATCCGCGTA CGGTTCCAAA CAGCGATAAA AATAATGATA CAAGCAGTCA GTCACTCGAC
TTCAGCAGTA AGGTGGAGCC TGCGCTTAGC ACTAGTCCTG TTGTTGCAGC ATTAGAAACT
CGAGTGCATG AGCTTGAACA AATAGCGGCG AAGTTAGAGC AAGATATAGA AGAGAAAAAT
GCCGCCAAAG AGGGGGAGAT CTTTACTAAC AGCGAAGAGA CGACTAGTCC GTTGGCATGG
TTAAATGGAT TACTTAATGA TCTCGGCTTG GGTTTTGGCT GGGCAGCTTT CTATTTTACC
GTGTTTACAG CATGGTTCGA CGGTCAAACT CTAGGCAAGA AACTGTTTGG CATCCGTGTC
ATCCAACTCG ATGGCGTTAA AATTTCACTC TGGGCTGCAT TTGGTCGCTA TGGTGGTTAT
GCCGCAGGGT TTACTACGGG ACTGTTGGGC TTCTTTCAAA TCTATTGGGA TGCCAATAGG
CAGGCTATTC AAGACAAGAT CTCTGCAACG GTAGTAATCG ATGTACGCAA GAGTAAGCAT
GAAGCAGCGC AGGAACATGC ACCTATTGAT AACATCTCTA ATAACTTATC AATCGAAAGT
AGTGCAAACA TTTGA
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| Protein sequence | MSQQQITKHD DPKTWVTPFA FDLDPNILYM PLASPSKRGL AMLIDGLLVA VLAESAGWIF
ILLVLGTLLI QKQSKAVGKL FKWGLYLLML IGLISALVGY FGDVTSNLKT SNADSDSNIV
LPENDKGGLA TLAEIAGYVP AVIVASQCED FACAQINIEK VETALSYSSL NAEEQSNIIN
ELVVELPLTA AEKQQLYVTK EPLAAVSVET DIEASADISS DPRTVPNSDK NNDTSSQSLD
FSSKVEPALS TSPVVAALET RVHELEQIAA KLEQDIEEKN AAKEGEIFTN SEETTSPLAW
LNGLLNDLGL GFGWAAFYFT VFTAWFDGQT LGKKLFGIRV IQLDGVKISL WAAFGRYGGY
AAGFTTGLLG FFQIYWDANR QAIQDKISAT VVIDVRKSKH EAAQEHAPID NISNNLSIES
SANI
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