Gene Spea_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1619 
Symbol 
ID5662016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1960742 
End bp1961371 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID641236207 
Productsporulation domain-containing protein 
Protein accessionYP_001501479 
Protein GI157961445 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.250662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAGTC AATTTCAAAA CCGTCTTGTT GGTGTCATCG TGATTGTGGC ATTAGGGGTG 
ATTTTTTTAC CCGATATATT AGATGGTAAA AAGCAGCGAG AAGAAGAGCA GTTTGCTGAA
ATACCTTTGA GACCCGAGAT CCAAGAGAGC ACCTTGCCAG CTCAGAAAAT TGAAACGGTC
GATCTTGCTG TGAACGATGG TTCAAACGCT GATGGCGCTT CATTGGATAA CGCCACTCAT
TCTGGCGATG AGGAACGTTC CGGTAATGGC GATCGTTCCG GTGATGCCTC TTGGCACATA
GCCGAAGAGG GCGGGCAGCC AACAAAGCCG CAACAGTCAA AGCCTGCAGT TAAGTCGGTA
ACTAAACCGG CACTTGAATT AAAGAACGCT TGGACGATTC AACTTGGCAG CTTTAATAAT
GCAGCCAACG TTAGAGGGTT AGTTAAACGC CTTCGCGATA ATGGATTTAC CGCCTATACC
TTGCCGACTA AACCCGTCGA TGGTCAGTTA ACTAAGGTAT TTGTTGGGCC TAACGTTTCT
AAAGATAAGT TGAGCCGTAT GCAGAATGAT ATTGAAAAGC TGACGCAGCT AAAAGGTCGT
GTAGTTACTT ATAGCCCTGT CGAAAAATAA
 
Protein sequence
MSSQFQNRLV GVIVIVALGV IFLPDILDGK KQREEEQFAE IPLRPEIQES TLPAQKIETV 
DLAVNDGSNA DGASLDNATH SGDEERSGNG DRSGDASWHI AEEGGQPTKP QQSKPAVKSV
TKPALELKNA WTIQLGSFNN AANVRGLVKR LRDNGFTAYT LPTKPVDGQL TKVFVGPNVS
KDKLSRMQND IEKLTQLKGR VVTYSPVEK