Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1619 |
Symbol | |
ID | 5662016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1960742 |
End bp | 1961371 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236207 |
Product | sporulation domain-containing protein |
Protein accession | YP_001501479 |
Protein GI | 157961445 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.250662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTAGTC AATTTCAAAA CCGTCTTGTT GGTGTCATCG TGATTGTGGC ATTAGGGGTG ATTTTTTTAC CCGATATATT AGATGGTAAA AAGCAGCGAG AAGAAGAGCA GTTTGCTGAA ATACCTTTGA GACCCGAGAT CCAAGAGAGC ACCTTGCCAG CTCAGAAAAT TGAAACGGTC GATCTTGCTG TGAACGATGG TTCAAACGCT GATGGCGCTT CATTGGATAA CGCCACTCAT TCTGGCGATG AGGAACGTTC CGGTAATGGC GATCGTTCCG GTGATGCCTC TTGGCACATA GCCGAAGAGG GCGGGCAGCC AACAAAGCCG CAACAGTCAA AGCCTGCAGT TAAGTCGGTA ACTAAACCGG CACTTGAATT AAAGAACGCT TGGACGATTC AACTTGGCAG CTTTAATAAT GCAGCCAACG TTAGAGGGTT AGTTAAACGC CTTCGCGATA ATGGATTTAC CGCCTATACC TTGCCGACTA AACCCGTCGA TGGTCAGTTA ACTAAGGTAT TTGTTGGGCC TAACGTTTCT AAAGATAAGT TGAGCCGTAT GCAGAATGAT ATTGAAAAGC TGACGCAGCT AAAAGGTCGT GTAGTTACTT ATAGCCCTGT CGAAAAATAA
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Protein sequence | MSSQFQNRLV GVIVIVALGV IFLPDILDGK KQREEEQFAE IPLRPEIQES TLPAQKIETV DLAVNDGSNA DGASLDNATH SGDEERSGNG DRSGDASWHI AEEGGQPTKP QQSKPAVKSV TKPALELKNA WTIQLGSFNN AANVRGLVKR LRDNGFTAYT LPTKPVDGQL TKVFVGPNVS KDKLSRMQND IEKLTQLKGR VVTYSPVEK
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