| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1518 |
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| Symbol | |
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| ID | 5661915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1843894 |
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| End bp | 1846572 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236106 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_001501378 |
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| Protein GI | 157961344 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACA AACTAATAAA GTTAGCATTC TGTTTGATGT TAATGATGCC GCTATTTGCC
GTCGCTGAAA CGTTTGTCAG CTGGCAAAAG GTTGAGACGG AGCTCTCTGG ACCATTTCGT
TTAGGTGCTG GTGCGTTCAT AGCTGAGCAA GGTGAGCATG TCATTATCTC CTCAGGGCTG
GAATTTGAGC CGTTCACTCA ATCGTTAATT CAAGAGCAAC CATTAATCGT TGAAAACATG
CTGCTAACCG CTAAGCAACC TCAGCTTGTT TATATTGTTA CCCCCTATAG TGCAGTGGTA
TCGACTTCTT TATCGGCTAA CGATGGCAAT AGAGCCTATG CTGCTACAGC TCCTTTTGCC
GGGGGAACAC TTGTTATTGG TGGCATTAAT GCGCAGCAAG CATCGAATCG AGTCAATTTA
CTTGTATGGC AACAGAGCGC TTCTGTATTA GAGAGCTTTT TATTACCGCC ACTCCCCGTC
GCCGCAAAAT CGCCATCAGC TGTCATTGTC GAAAACACTG TGTATGTATT AACGGGGAAG
GATGCAAATA ACCAGTTTTT CGCTTTGGAT TTGAGCGCGT TAACAGCAGA TAAAAACTTG
CTTTCAAACA ATCAATTTGA TTTTGAACGC TTCGCAGCCA AGAGTGCTTG GCGCGCTTTA
CCGGCATTAC CAATTGAAAG TACCAGTTAT CAAAATGGTG TGCAGTTAGC GGTTCAAAAT
GATGGCAGTG GTGAAAAAAT ATATGCGATA GGGGGCTATC GTCTATTAAA CCAAGAGCCG
AATTCAAGTC ATATACCTTT GCCCTTAACG GCTTTTTGGA AGTTTAATCC AGCCATTGAA
ACTCTCGCTA ATCAATGGCA AAAACTCGGC GATATTTCAG AGACGAATAA TGACTTTAAT
CAGCAAGTAA ATAGCCTAGC GACATTCGGC CATTCACACA TACTGGCCTT TACCGATAAG
GGCGATACTC TATCATTTAA TGCGATAACT AATGGTTGGA CGCAATATTT AACGGCGAAT
GACAATCGCA ATACTCCAGC AGGTTTTAGT GGCGGGATCA CTGACAGCAC CATGACTGCA
AACGGTTATT TCTATGCACT AAGTCCTAGT CTTGATAACC GCTCTGCATC TACATTATGG
CAAGCCTCAT TAAAGCGACC TGCTAAGGAT TTTGGTTGGA TCAACATGAC GGTCCTAGTG
ACATATTTAG TATTTGTCGT TTTGGTTGGC TTGTTCTTCG TCTTCAAAAA TAGAACCACT
AATGATTATT TTCGTGGTGG TCAATCGATT CCTTGGTGGG CCGCAGCCTG TTCAATTTAT
GCCACCATGC TGAGTTCGTT GACTTACGTT GCGTTACCCG CAGTGGTTTT TCAGAGCAAC
TGGTTATTGT TATTGGGGAT CTGGATGATT ATTGCTGTCG CCCCTATTGC TATTTATGTT
GCTATGCCGT TTTTCCGTCA AATTGATGCA ACGAGCGCCT ACGAATACCT TTCAAAACGC
TTCAACATGA GCGTCAGATT ATTTGCGAGT GGTTTATTTA CGCTATTCCA TGTTGGACGA
ATGGGCATTG TTATGGCACT TACTGCGTTA GCTTTGTCAG CCGTTACGCC GTTATCTCCG
AGTGAGAGCG TATTGATAAT GGGAGTTCTT TGTCTCATCT ATTGCACTAT GGGCGGGATT
GAAGCGGTGA TTTGGACTGA TACCTTACAA ACCATAGTGT TACTTATTGG CGCCGTGCTG
TGCTTTATTA TCATCATTGC AGGGTTAGAC GGAGGTATGG CTGAGTTTAT TAGTATTGGC
CTTACGGATA ATAAATTTAC CATGGTGGAT GTTGATTTTA GCCTAGATAG CATAACGACT
TTGTCTATTT GGGTCGTTGT CATTGGTGGT ATTGGCCAGA ATCTATCAAG TTATACGGCA
GATCAAGCCG TAGTGCAGCG TTACATGGTG ACTAAGAACC CGAAAGAAGC CAGCCGTTCT
ATCTGGGCAA ATGCCATTAT TGCCGCGCCT GCAGCGCTAT TGTTTTTCTG TATTGGTACT
GGGCTGTATG CGTTTTACCA AACCCACCCT GAGAAGTTAG ATCCTACGAT TCAAATAGAT
CAAATATTCC CAACCTTTAT TGCAACAGAG CTGCCCGTGG GGCTAGCAGG CTTAATTGTG
GCCGGGATAT TCGCCGCCGC ACAATCTACC GTGTCAACTA GCATGAACTC CATTGCCACG
ACTCTTGTGA CTGACTTTAT ACGCCCCTTT AATTTGGTAA AAACAGAGCA AGGCTATATG
AGCGCCGCAC GTTGGCTGAC GTTTATTATG GGCGTATTGG GAACCTTAGC GGGCCTTATC
TTTATTGACC CTGAAATTCG CTCCTTAATG GAGGCGTATT TTAAGGTAAT AGGCATGTTT
ATGGGAGCGT TAGGAGGTTT ATTTGTGCTG GGAGCATTGA CTAAAAAAGC CAATTCATTT
GGCGCGATAG TCGGAATTTT AGCTGGCGTT GCAACCATGG TTTCAGCTTG GCAGTTGGGA
TGGGCAAATG GTTACTTGTA CGCCACGATA GGAATCGTGT CTTGTTTAGT GTTTGGCTAC
CTTGCCAGCT TACTGACACA AAACACGAAA GCAGCGAATA AAGACTTAAC TGGGTTAACA
CTTTACACAA TGGACTCAGT CGCCATCAAA CCATCGTAA
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| Protein sequence | MTNKLIKLAF CLMLMMPLFA VAETFVSWQK VETELSGPFR LGAGAFIAEQ GEHVIISSGL
EFEPFTQSLI QEQPLIVENM LLTAKQPQLV YIVTPYSAVV STSLSANDGN RAYAATAPFA
GGTLVIGGIN AQQASNRVNL LVWQQSASVL ESFLLPPLPV AAKSPSAVIV ENTVYVLTGK
DANNQFFALD LSALTADKNL LSNNQFDFER FAAKSAWRAL PALPIESTSY QNGVQLAVQN
DGSGEKIYAI GGYRLLNQEP NSSHIPLPLT AFWKFNPAIE TLANQWQKLG DISETNNDFN
QQVNSLATFG HSHILAFTDK GDTLSFNAIT NGWTQYLTAN DNRNTPAGFS GGITDSTMTA
NGYFYALSPS LDNRSASTLW QASLKRPAKD FGWINMTVLV TYLVFVVLVG LFFVFKNRTT
NDYFRGGQSI PWWAAACSIY ATMLSSLTYV ALPAVVFQSN WLLLLGIWMI IAVAPIAIYV
AMPFFRQIDA TSAYEYLSKR FNMSVRLFAS GLFTLFHVGR MGIVMALTAL ALSAVTPLSP
SESVLIMGVL CLIYCTMGGI EAVIWTDTLQ TIVLLIGAVL CFIIIIAGLD GGMAEFISIG
LTDNKFTMVD VDFSLDSITT LSIWVVVIGG IGQNLSSYTA DQAVVQRYMV TKNPKEASRS
IWANAIIAAP AALLFFCIGT GLYAFYQTHP EKLDPTIQID QIFPTFIATE LPVGLAGLIV
AGIFAAAQST VSTSMNSIAT TLVTDFIRPF NLVKTEQGYM SAARWLTFIM GVLGTLAGLI
FIDPEIRSLM EAYFKVIGMF MGALGGLFVL GALTKKANSF GAIVGILAGV ATMVSAWQLG
WANGYLYATI GIVSCLVFGY LASLLTQNTK AANKDLTGLT LYTMDSVAIK PS
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