| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1429 |
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| Symbol | |
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| ID | 5661826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1737840 |
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| End bp | 1739147 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235991 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001501289 |
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| Protein GI | 157961255 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCATA TTCACGGCAT ACTGTTCACA ACTCAAAAGA TGCACTGCCA AGCAGGTAAA
GCCTACAAGG CTTTTGCCCT TGTGATGAGC ATCTGTCTGT CTTTATTGCT GCTAACGGCT
TGCGTCACCC CGCATCGTCC TGAAAAAGCG GTAATCTGTG CTGGCAACAG TGATGACAAC
ATGACTCAGT GCCACTTCTA TGATCGCGAT ACGCCTTATA TGCGCAGCAA TAAATCTGCT
CAGGCGATGA ATATTGCCCC TCAAGCCCCA ACTAATCTTA TGGGAAACAC TTGGTTGATG
TACGCCGGGC AAGCGCAGCA GCCACTACAC CAACCGCAAC ATATTCGTTT ATCCGTGGGT
GATAAGCTCA AGATCCGAGT GTTTAACGGA GAAGAGTTCA GCGGTGATGT TGAAGTTAAC
AATGACGGCT ATATCTATCT CCCCTACTTA GAGCCTATCC ATGCAAAAGG CTTAAATATT
TCCCAGTTAA CAAACACAAT TGAGCAATAC CTAGTCGATG AGGAGTTTAT GCTTAAAAAC
AGCGCCCGCC TGAGCATTAC TCCATTAAAG TGGGCACCGG TCGAAATCAC GGTATCTGGT
GGAGTATTTG AGCCGGGGCA ACATCAGATC AATAAAAAAT CAGACATTGA GATCATCGAC
GATGACGGTG ACCACAGCGG CGATCAGGCA GATCAACGTA CTATCGAGGC GGCGCTAAGA
GCATCTGGCG GAGTGCGTCC CGATGCGGAT ATATCGGCCA TTACGGTGAT AAGAGGTCAA
CATAGTTTTA CTCTCGATTT ATCCGGTGTG ATCCACGGCT ACCCAGTACC ACGAATAACA
TTAATGTCAG GGGATCATAT CCACGTACCG CAACACGATT ACTTCGATGA CGCCCTCGCT
CGGCCATCGC AAATTACCGC ACCGGGTATT CGGGTGTTCA TATCGAACTT GACCCAACCC
GCTTCGAGTA ACGCCCAATC TGCCGTTGAC ACCGACGCAA CTCGCTTTCC TTACGGTACT
CGCCTGTTAA GCGGTGCTAT AGCCGCAAAC TGTGTCGGCG GCGCGCAGTC TACTAATGCC
AGTCGCTACT TGCTACTGAT CACCAAGAAT CCATTAACCG CTCAAGTCGA TGTGGTTGAA
CGCTCAATGG ATAGTTTGAT CAGACATTCT TGGGAAACAG GCATGAACCC AATATTAATG
CCTGGAGATG GCATCGCTTG TTACGACTCT CGTGTCACCA ATATCCGAGA AATCGCACGC
ACCATTACTG AGGTGCTTGT TCCAGCGACT CTTCTTGAGT TGCTGTAA
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| Protein sequence | MGHIHGILFT TQKMHCQAGK AYKAFALVMS ICLSLLLLTA CVTPHRPEKA VICAGNSDDN
MTQCHFYDRD TPYMRSNKSA QAMNIAPQAP TNLMGNTWLM YAGQAQQPLH QPQHIRLSVG
DKLKIRVFNG EEFSGDVEVN NDGYIYLPYL EPIHAKGLNI SQLTNTIEQY LVDEEFMLKN
SARLSITPLK WAPVEITVSG GVFEPGQHQI NKKSDIEIID DDGDHSGDQA DQRTIEAALR
ASGGVRPDAD ISAITVIRGQ HSFTLDLSGV IHGYPVPRIT LMSGDHIHVP QHDYFDDALA
RPSQITAPGI RVFISNLTQP ASSNAQSAVD TDATRFPYGT RLLSGAIAAN CVGGAQSTNA
SRYLLLITKN PLTAQVDVVE RSMDSLIRHS WETGMNPILM PGDGIACYDS RVTNIREIAR
TITEVLVPAT LLELL
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