| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1361 |
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| Symbol | fliF |
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| ID | 5661760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1658188 |
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| End bp | 1659888 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235925 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001501223 |
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| Protein GI | 157961189 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGTAG GAACAGGCTC AGGTTTAGCA TCGAGCCCAC AAACATCAGG TGTTCAAGAA
GAACATAAGC CAGGCATAAT GGGCGCTCTC GGTGGCGTCG ATATGCTGCG CCAATTGACG
ATGATCTTGG CCCTTGCCAT CTGTTTAGCC GTGGCCGTTT TTGTCATGAT TTGGGCGCAA
GAACCAGAGT ATCGTCCTCT TGGCCAGATG AGCACCGCAG AAATGGTGCA AGTGTTGGAT
GCACTTGATA AAAATCAGGT TAAGTACGAA ATCCAAGGCG ATGTAGTCAA AGTTCCTGAA
GATAAATACC AAGATGTGAA GATGTTATTG AGCCGTGAAG GGCTAGATAA CCAAGAAGCA
AATAATGACT TTTTAAATAA AGACAGTGGT TTTGGTGTGA GTCAGCGCAT GGAGCAGGCA
CGTCTCAAGC ACAGCCAAGA GCAAAACCTT GCCCGCGTTA TCGAAGAGCT AAAGAGTGTC
ACTCGTGCGA AAGTTATTTT AGCCTTACCG AGAGAGAATG TGTTTGCCCG CAACCGCTCT
AAGCCAAGTG CTACCGTAGT GGTTAGCACT CGTCGCAGTG GTTTAAGTCA AGAAGAGGTC
GACTCGATTG TCGATATCGT CGCCTCAGCG GTACATAACC TCGAACCGAA CAAGGTCACA
GTTACCGATG CTAATGGCCG CCTGCTAAAT TCTGGTACCC AAGATGGTGC CTCAGCCATC
GCCCGTCGTG AGCTTGAAAT TGTCCAGCAA AAAGAGTCTG AATATCGCAC TAAAGTCGAA
TCGATTCTTA TGCCAATTTT AGGTCCTGAG AATTTTACCT CCCAGGTCGA TGTCAGCATG
GACTTTACCG CCGTTGAGCA AACCGCTAAG CGTTATAACC CTGACTTACC GGCACTAAGA
AGCGAGATGG TGGTTGAGAA TAACTCTGCT GGAGGTACGA GTGGCGGTAT TCCTGGCGCA
TTGTCTAATC AACCTCCTAT GGCGGCAGAT ATACCTCAGG AAGTGAATGC AGAAGAAAGC
CTTGCGGTTT CATCGGGTAC TAGTCACAAA GAAGCGACAC GTAACTTTGA GTTAAACACC
ACTATTAGCC ACACTCGTCA GCAAGTGGGC ACCCTAAGAC GGGTGAGCGT ATCGGTTGCG
GTTGATTTCA AAAATGGTCC TGTATCGGAA GATGGCAGCG TTAACCGCGT ACCACGCACA
GAGCAAGAGC TAGCCAATAT CCGTCGATTA CTCGAAGGGG CGGTCGGTTT TAATACTCAG
CGCGGCGATA TTATTGAAGT GGTTAGTGTG CCATTTATGG ATCAGCTTAT CGAGGATGCA
CCACCGCAAG AGATGTGGGA ACAGCCCTGG TTCTGGCGCG CGGTAAAGTT GGTGCTCGGT
GCGTTGGTTG TTCTTGTGTT GATCCTAGCT GTTGTTCGCC CAATGCTGAA GAGGCTGGTT
TACCCTGATA GTGTCAAAAT GCCAGATGAG CCACAAACTG GTGGTGAGCT AGCAGAAATT
GAAGATCAGT ATGCAGCCGA TACCTTAGGC ATGTTACAAC GCCCCGAAGC AGAATACAGT
TATGCAGATG ATGGCTCTAT CTTGATCCCT AATCTGCATA AAGACGATGA CATGATTAAG
GCTATTCGTG CACTAGTGGC TAATGAGCCT GAACTATCGA CACAAGTCGT GAAAAACTGG
TTACTTGAAG ATGACAAATA A
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| Protein sequence | MVVGTGSGLA SSPQTSGVQE EHKPGIMGAL GGVDMLRQLT MILALAICLA VAVFVMIWAQ
EPEYRPLGQM STAEMVQVLD ALDKNQVKYE IQGDVVKVPE DKYQDVKMLL SREGLDNQEA
NNDFLNKDSG FGVSQRMEQA RLKHSQEQNL ARVIEELKSV TRAKVILALP RENVFARNRS
KPSATVVVST RRSGLSQEEV DSIVDIVASA VHNLEPNKVT VTDANGRLLN SGTQDGASAI
ARRELEIVQQ KESEYRTKVE SILMPILGPE NFTSQVDVSM DFTAVEQTAK RYNPDLPALR
SEMVVENNSA GGTSGGIPGA LSNQPPMAAD IPQEVNAEES LAVSSGTSHK EATRNFELNT
TISHTRQQVG TLRRVSVSVA VDFKNGPVSE DGSVNRVPRT EQELANIRRL LEGAVGFNTQ
RGDIIEVVSV PFMDQLIEDA PPQEMWEQPW FWRAVKLVLG ALVVLVLILA VVRPMLKRLV
YPDSVKMPDE PQTGGELAEI EDQYAADTLG MLQRPEAEYS YADDGSILIP NLHKDDDMIK
AIRALVANEP ELSTQVVKNW LLEDDK
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