| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1249 |
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| Symbol | |
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| ID | 5661648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1522829 |
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| End bp | 1523641 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641235811 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001501111 |
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| Protein GI | 157961077 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACCT TATCCGCATT AATATCTCAT GCAGAACCCA AAGCGAACTT ATTCTTCTCA
GGTAATTTAT GTGGAAGCTC TTCAAGTACT GAGCACCCTG CTGGTGGAAT ATTGCATTTA
GTTAGAACCG GTGAGATGCT TCTATTTGAA GAGCATGGCT TAACGCATAG AATCACTGAA
CCAACACTCA TTATTTATCC CAAAGGGAAA GCGCATCGTC TCCAACCGCA AACCTTAGAA
GGTTGTGATG TTGTATGTGC CAACTTAACC TTTAAAGATT CGCCACTATA CCGAGCTCTA
CCCGATGCTA TAGTTCTCCC CCTTAGCGAA TTAGATAGTT TATCAGACAC AATCAACATG
TTATTTGTTG AGGCTTTTAC ATCGCGTTTT GCTCAAGTTG CCATCATCTC AACTTTACTT
GATCTGCTGC TGTTATTGGT ACTTCGTCAT TTAGTTGAAA ACAGAATATG TCAAGAAGGT
GTTTTATCAG CTTTATCAGA TCCCAAGCTC TCAAAAGCCA TCGAAATAAT CCACAAACAA
ATAGATTACC CATGGACCAT TGATGAGTTA GCAAATAAAG TTGGGATGTC ACGTGCTAGG
TTTGCAGCAT TATTTAATCA AACCATTGGA CAACCACCTC TCAGCTACGT CACAGAGGCT
CGGCTGCTGT TAGCTAAGAA GTTGCTGCTG AAGGGAGAAC CAATCAAATC AGTAAGTTTA
GAAGTAGGGT ACAGCGGAAG CGTTGCATTT TCTCGCGCAT TCCAACGTCA ATTCGGTGAA
ACTCCACGAG CCTGGTATCT GGAACAAACT TAA
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| Protein sequence | MDTLSALISH AEPKANLFFS GNLCGSSSST EHPAGGILHL VRTGEMLLFE EHGLTHRITE
PTLIIYPKGK AHRLQPQTLE GCDVVCANLT FKDSPLYRAL PDAIVLPLSE LDSLSDTINM
LFVEAFTSRF AQVAIISTLL DLLLLLVLRH LVENRICQEG VLSALSDPKL SKAIEIIHKQ
IDYPWTIDEL ANKVGMSRAR FAALFNQTIG QPPLSYVTEA RLLLAKKLLL KGEPIKSVSL
EVGYSGSVAF SRAFQRQFGE TPRAWYLEQT
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