| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1241 |
|---|
| Symbol | |
|---|
| ID | 5661640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 1514218 |
|---|
| End bp | 1515216 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641235803 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001501103 |
|---|
| Protein GI | 157961069 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3528] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCTTCT TATCGAATTC CAAAACACTA AGCAGATTAA GCTTAGTGAG CCTACTTATC
TGTGCCCCCT TTTCTTCCTA TGCCGATCAA TGGCACTTAA GTTTTGATAA CGATGTGGTT
ATTGGCCAAG ATGGCGACTA CTCCAATGGA TTCGTCTTTG GCTGGCAAGC ACTGCCCGAG
AGTGACTTTT CATCAGCACC TTGGCCATTT AGCTGGCAAC AAGCGCTACG ATTTTCAAGC
CAAAGTCAGA CATCACAATG GGGAGCCAAG ATCTACCAAA GAATGTGGAC CCCGAGTGAG
ATTGAATATG ATTACGCCCA ACCAAATGAC CGCCCCTATG CAGGCCTACT CGAGTTAGAA
AGCTTTACAG GTAGCTATAG TGCATCCTTT GCGCAAAAAA ACTGGTTTAG CGTTGGCGTT
ATTGGCCCTG CATCAGGGGC TCAAACTATG CAAGAGTTAG TGCATAAGAT CACTCCATCA
ACGCCGCCTA AGGGCTGGCA ATATCAAGTC GAGAATCAAC TCACTCTACA GATGGCATAC
GAGGTAGATG CACTCGCGTT TCGCCAAGAT GCGACAGATG ATAGCCAATG GGAATTAAGT
GGTCATAGTC ATACCATGCT AGGAAACTTC CGCTCTGAAG CAAATCTTGG TTTTACACTA
CGCTGGGGAG ATGACTTAGC CGATTCATTT GGTCAGCTCA GTAGCCATGC GGGTCACTAT
GGTCAATTTA GTGCGACTGC TCGCAAAAGT GGGAGTTGGA CTGTTTATTC TCGAGCGCAG
TTAGGATATC GCTTTAATGA TCTCACCATC GACGGTGATG TGCCCTACGA CTCCCATGTG
CAGATGAAAC ATCAGCAAGT CAGAGCCAGC ACAGGAGTGA TTTGGGCGTT TCCCACTTGG
TCTGTCAGTT GGAGTGTAGA GGTTTATACG TCAGAATATG AGCCCGACCC AAACAGCTGG
CATGGCTATG GGGTGCTTAG CTATAGCTTT GTACTATAG
|
|---|
| Protein sequence | MTFLSNSKTL SRLSLVSLLI CAPFSSYADQ WHLSFDNDVV IGQDGDYSNG FVFGWQALPE
SDFSSAPWPF SWQQALRFSS QSQTSQWGAK IYQRMWTPSE IEYDYAQPND RPYAGLLELE
SFTGSYSASF AQKNWFSVGV IGPASGAQTM QELVHKITPS TPPKGWQYQV ENQLTLQMAY
EVDALAFRQD ATDDSQWELS GHSHTMLGNF RSEANLGFTL RWGDDLADSF GQLSSHAGHY
GQFSATARKS GSWTVYSRAQ LGYRFNDLTI DGDVPYDSHV QMKHQQVRAS TGVIWAFPTW
SVSWSVEVYT SEYEPDPNSW HGYGVLSYSF VL
|
|---|
| |