| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1177 |
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| Symbol | |
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| ID | 5661576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1426483 |
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| End bp | 1428723 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235729 |
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| Product | Hpt sensor hybrid histidine kinase |
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| Protein accession | YP_001501039 |
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| Protein GI | 157961005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTC AACAAATGGC TAAACCTGTT GTCTTTCTGT TGCTATTCAC TGGCTTATCA
AGCTCGCTAT TAGCACATTC TTTTGAACTC AAACCACAAG AGCAGCTACA GCCAAAAACA
CTGGTTACAG CGCCCACCGT TACGGCAGGT CAAGAGTCTA TCGCACTCAC TAGCCAACTT
AAGTACGACG AAACCCTATC AAGGTTTTTC CAGTTGATCT TATTTACGCT TATTTCTCTA
GTGCTAGCGC TTAACTTCTT GCGGAGTAAA AAACGTAAAG TGTTTTTATC ACAAGCCCTT
GCCAGTGGCC AAGCCAGTCA TGATCAGATG CAGTGGTTAA TGGCCGTACT GGATAATTTT
CCCGGCATGG TGTTGATCTC TGACGCCAAC GGCAAACCAA TGTTAGCCAA CAAGGCCTAT
AACACCTGCG TACAGAGCGG CTCAGCGACC AATCCCGACT CAATTATCAG TGTCGGCAAT
AGCCAGAGTG ATGAGTACGC GATAGCAGAT AAATATTACC GCATCTCCCG TGAAGTCATC
CGTCATAATG ATGGTCATGA ATACCACATC ACAGTGTTTG CCGACTTCAC CGAATTAAAG
CAGCGCAAGC AAGAACTCAA GCTTTCTCAG CAACAGGCTG TCGACGCATT AAAGGCAAGA
GAGTCATTTT TAGGGATTAT CAGCCATGAG CTGAGAACGC CTCTCGCTGC AATGATAGGT
TTAATGGAGC TACTAAAACC TGAGCTTAAA TCGACGCAAA ATCAAGAGTT AATGAAAAAT
GCTCAGGCCT CTGCCGAGCG CTTAAAAGCC TTAGTTAACG ATATCTTAGA CTTCTCCAAA
ATGGAGGCGG ATCAGTTACT GCTCGATATT TATCAAGGCA ATATCTTTGA TGAACTCGGC
TCTATGCTCA GAACACTCGA AGCCGGCGCT CGAGTCAAAG GGCTCGAGTT TATTGTCGAC
TGGCAACCCA CAAGGCTCTG TCATGCAAAG CTCGATTGGC TCAGACTCAG CCAACTGGTC
AACAACTTGG TGAGTAATGC CATCAAGTTC ACCCAACAGG GCTTAGTCAA GGTTTCGGTA
TCGAATACTG AGCAACAGCT GTACCTGTCG ATTGAAGACA GCGGCTGCGG CATGACGTCG
GCGCAATTGC TCACGCTATT TCAACCCTTT GTACAAGGTG ACCCAAGCAT TAACAGAAAC
TATGGCGGCA GTGGATTAGG CATGTCTATC GTTGAGCATT TAGTGCAGCT AATGGGTGGA
GAGATAAAGG TGCAGAGCCA ACACGGTCAA GGTACTCAAG TTTGTGTGAG CCTACCCGCT
GTATTTCACC CTTTAACACA GGCTATCGTG CCCGACGTCC AAACTCAAAA TGACAAGCTA
ACAGGCTGGC TCATGCAGTG GGGAGTGAAC TTACATCAAC AAGGTGCATG TGGACTCCCC
CTTGATGAGT TTAATCTGTC GAGCAATATC TACCCGGATC TATTGTTAAA CGCGCTTTGT
TTACCAAATG AGCTCGAGCA GCACAATACG CCTACAAATC TAAAGTATGC AGGAAAAGTG
TTAGTCGCCG ATGACGATCC CATCAACCGT TTCCTGTTTC AGAAACAACT TAAAAAGTTA
GGCTTAGAGG TGGTGACAGT GAATGATGGC CTGGAGGCAC TCGATTACTT AACTCATCAC
TTAGGAGCCA TAACCTTGCT TATTACCGAC TGCCATATGC CTAACCTAAA TGGCTATGAC
TTAGTGCGCA AGCTTAGAGC TAAAAGCGAG TTTAAAGCTT TACCTATAAT AGGTTGCACC
GCAGAAGACT CGCGCTTAGT CGCCGAAAAA GCCCAATGTG TAGGCATGGA TGAGCTCATC
TATAAGCCCT ACTCCTTCTA TACACTTAGC ACGCTATTAG GGCGCTATTG CCGATTGCAA
CCAACAGATG CTGGTCAGGA TAAACTCGAC TGGTTAAATG AATATGAGAT AGAAGAGCAA
CTTGAGTTTT CAGCCGTTGT TAGAGACTCG CTCATTGCAG ATAAAGCACA GCTTGTAGAA
CAAGCGATAC CACTTGCGGC AATCTGTCAT CGTATCAAAG GGGCCGCGAA TGCACTCAAT
CTCCATGAGT TAGCCTCCCT CGCCTACGCC TGTGAAACCG TGTCGGCTGC TAATGCCTCG
TTGGCAACTA AGCGACTCGT CGATGAGATT GACTGCATCA TCACAGCGAT TAACAACTGG
CTCAGTAAAC AATATTTATG A
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| Protein sequence | MTAQQMAKPV VFLLLFTGLS SSLLAHSFEL KPQEQLQPKT LVTAPTVTAG QESIALTSQL
KYDETLSRFF QLILFTLISL VLALNFLRSK KRKVFLSQAL ASGQASHDQM QWLMAVLDNF
PGMVLISDAN GKPMLANKAY NTCVQSGSAT NPDSIISVGN SQSDEYAIAD KYYRISREVI
RHNDGHEYHI TVFADFTELK QRKQELKLSQ QQAVDALKAR ESFLGIISHE LRTPLAAMIG
LMELLKPELK STQNQELMKN AQASAERLKA LVNDILDFSK MEADQLLLDI YQGNIFDELG
SMLRTLEAGA RVKGLEFIVD WQPTRLCHAK LDWLRLSQLV NNLVSNAIKF TQQGLVKVSV
SNTEQQLYLS IEDSGCGMTS AQLLTLFQPF VQGDPSINRN YGGSGLGMSI VEHLVQLMGG
EIKVQSQHGQ GTQVCVSLPA VFHPLTQAIV PDVQTQNDKL TGWLMQWGVN LHQQGACGLP
LDEFNLSSNI YPDLLLNALC LPNELEQHNT PTNLKYAGKV LVADDDPINR FLFQKQLKKL
GLEVVTVNDG LEALDYLTHH LGAITLLITD CHMPNLNGYD LVRKLRAKSE FKALPIIGCT
AEDSRLVAEK AQCVGMDELI YKPYSFYTLS TLLGRYCRLQ PTDAGQDKLD WLNEYEIEEQ
LEFSAVVRDS LIADKAQLVE QAIPLAAICH RIKGAANALN LHELASLAYA CETVSAANAS
LATKRLVDEI DCIITAINNW LSKQYL
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