Gene Spea_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1103 
Symbol 
ID5661502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1336417 
End bp1337601 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content45% 
IMG OID641235649 
Producthypothetical protein 
Protein accessionYP_001500965 
Protein GI157960931 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.183133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA TAATAGATAA ACCCCGAGTA AGTATAGCTA GTGTGGCAGC TGAATCGGTT 
TCTAAGCCGG CAGCAAAACC TAGACTTAAG TCATTAGATG CACTGCGTGG CTTTGATATG
TTTTGGATCT TAGGTGGTGA AGCCATATTT GCAGCTTTGC TGCTATTAAC AGGCTGGGCT
GGTTTTAACT GGTTTGATAG CCAGATGCAT CATAGTACTT GGCATGGCTT TACTTTCTAC
GATCTAATTT TCCCGCTGTT TATTTTCCTC TCCGGCGTTG CACTAGGCCT GTCACCCAAG
CGTTTAGACA AGCTACCATT GCCTCAGCGG ATGCCGCTAT ACCAGCATGC AATTAAACGA
CTGTTACTAT TACTGCTATT TGGGGTTATC TATAACCATG GCTGGGGGAC GGGAGCACCA
TTCGCGCTGG GAGATATTCG TTATGCCAGC GTGCTAGGTA GAATTGCCTT TGCATGGTTT
TTCTGCGCCT TGTTAGTGTG GCATACCAGT CTAAGAACCC AGATAGTTAC TGCCATCCTT
GTATTAGTCG GTTACGCCGT CCTGCAAACT TTCCCTTTTA TGACGTTAGG TAATAGCGGC
GCTTTTAGCC AGACAGGCTC AATTAACGCC GCTGTAGATA GCTTGTTGTT ACCGGGCATA
ACTTATCAGA ATGCAGCGGT CGACCCAGAG GGAATACTCT CGACTGTTCC TGCCGTTGTA
AATGGCTTAT TTGGTGTGTT TGTGGGGCAC TTTATTGTAA AGCCACAGGT TAAAGGGGAG
TGGTTTAAAG TCGCGATATT GGCACTGTCA GGCTTAGGTT TATTGGTATT AGGTTGGGCG
GTTTCGCCAT GGAATCCCGT GAATAAAACC CTGTGGACCA GTAGCTTTAC CTTAGTGACT
TCAGGTTGGA GCATACTTTT CTTAGCCTTG TTCTACACCA TTATAGATGT TTTAAAAGTG
CAGAAGTGGG CATTTTTCTT CACGGTTATT GGCTGTAACT CTATCGTTAT CTACATAGCG
ACTAGCATAG TCAATTGGAA GTACGCCGCA ACGAGTCTAT TTGGTGGTGT CATTTCAAGT
CTACCAAATC ATGTTCAGGC ACTTGGCAGC GTAACTTCTC TGTTGTTGGT GCAATGGTTA
GTTTTGTACT GGATGTATAA GCGCAATATC TTCATTAAGG TTTAA
 
Protein sequence
MTTIIDKPRV SIASVAAESV SKPAAKPRLK SLDALRGFDM FWILGGEAIF AALLLLTGWA 
GFNWFDSQMH HSTWHGFTFY DLIFPLFIFL SGVALGLSPK RLDKLPLPQR MPLYQHAIKR
LLLLLLFGVI YNHGWGTGAP FALGDIRYAS VLGRIAFAWF FCALLVWHTS LRTQIVTAIL
VLVGYAVLQT FPFMTLGNSG AFSQTGSINA AVDSLLLPGI TYQNAAVDPE GILSTVPAVV
NGLFGVFVGH FIVKPQVKGE WFKVAILALS GLGLLVLGWA VSPWNPVNKT LWTSSFTLVT
SGWSILFLAL FYTIIDVLKV QKWAFFFTVI GCNSIVIYIA TSIVNWKYAA TSLFGGVISS
LPNHVQALGS VTSLLLVQWL VLYWMYKRNI FIKV