| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1070 |
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| Symbol | |
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| ID | 5661469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1294467 |
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| End bp | 1295321 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235616 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001500932 |
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| Protein GI | 157960898 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.858381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTA CTCACCTTAT TGGAGCACAT GTTAGCGCAG CTGGAGGCAT AGCCAATGCC
CCCCTTAACG CAGCAGCCAT TGGCGCAAAT GCTTTTGCCC TATTCACCAA GAACCAACGT
CGATGGCAAG CAGCCCCATT AGATCCTAAG CAGGTAGCAC TATTTCAGCA GCACTGCGTC
GAAGCTGACA TTGCATTTGA GGCGATTTTG CCCCATGACA GCTACCTCAT AAATCTTGGC
CACCCCGATC CTGAGTTACT CAATAAGTCA CGAGAAGCCT TTTATGATGA AATGCAGCGC
TGTGAACAGA TAGGATTAAA GCTACTCAAT TTTCATCCGG GTAGCCATCT TCGAAAAATG
CCTATCGATG ACTGCTTAAC CAATATTAGC GAGTCGATTA ATTTAGCCTT GGAACGTACA
TCTAATGTCA CTGCAGTAAT CGAAAATACC GCAGGTCAGG GCTCAAACCT TGGCCACAGC
TTCGAGCAAC TAGCACAGAT TATCGATGGA GTTGAGGATA AAACTAGAGT TGGTATCTGT
ATCGATACCT GCCACCTATT TGCTGCAGGC TACGATATTC GAACTAAAGC CACCTGCGAG
CAGACTTTTG AACTATTCGA TAAAATTGTC GGCAACCGAT ACCTAAAGGC CATGCATCTG
AATGACAGCA AGACGCCGCT CAACAGTCGG GTCGACCGTC ACGAGTCTTT AGGTCAAGGT
GAAATCGGCC AAGAGGCATT TGCCAGCTTA ATGAAGTTAG ATGCCGTAAA GGGGATCCCG
CTAATTTTAG AGACGGTACG AGCAGAGATC TGGCAAGAGG AGATTAATTG GTTACGCTAC
CTTGCAAAAC AGTAA
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| Protein sequence | MQATHLIGAH VSAAGGIANA PLNAAAIGAN AFALFTKNQR RWQAAPLDPK QVALFQQHCV
EADIAFEAIL PHDSYLINLG HPDPELLNKS REAFYDEMQR CEQIGLKLLN FHPGSHLRKM
PIDDCLTNIS ESINLALERT SNVTAVIENT AGQGSNLGHS FEQLAQIIDG VEDKTRVGIC
IDTCHLFAAG YDIRTKATCE QTFELFDKIV GNRYLKAMHL NDSKTPLNSR VDRHESLGQG
EIGQEAFASL MKLDAVKGIP LILETVRAEI WQEEINWLRY LAKQ
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