Gene Spea_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0944 
Symbol 
ID5661343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1152244 
End bp1153005 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content49% 
IMG OID641235489 
Productpeptidase C26 
Protein accessionYP_001500806 
Protein GI157960772 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG TTGGGCTCGC AGTTGTTGGC GTGACAGCAT GTAATATGCA GTTGGGCTTA 
CACCCCTTTA ATATAGTGGG TGAAAAGTAT CTTCTAGCAA TCGCAGATGC GACACAATCT
TGGCCATTGG TTATTCCAGC TTTAGGGCAT TGCCCTGCCG AGGTTGTACT TTCTCGTTTG
GACGGAATTT TATTCACCGG CTCCCCCTCA AATATCGAAC CGCATCATTT TGACGGCCCC
GCAAGTGATG AGGGAACACA TCATGATCCT AAGCGCGATG CGACAACCTT ACCTCTGTTA
AAAGCGGCAA TTGATGCTGG CGTGCCAGTG CTTGCGATCT GCCGTGGCTT TCAAGAGATG
AATGTTGTGT TTGGTGGCAG TTTGCATCAA AAGTTGCATG AGCTGGGCGG GTTTATTGAG
CATAGAGAAG ACAAAACGAA ATCCGTAGAA GTGCAATATG GTATTTCCCA CGAGGTTCAA
ATAGAACCTG GGGGACTGCT TCACGATGCA TGGGGCCGCA GCTCTGCAGA GGTGAACTCT
GTCCATACCC AAGGCGTAGA CCGCCTTGGG GTTGGGTTGC GGCCAGAAGC ATATGCAACC
GATGGTCTGA TAGAAGCCTT TTCTGTCAGA AACGCAAAGA ATTTTGCACT AGGTGTGCAG
TGGCATCCGG AGTGGAAGGC ACTTGATAGT CCTTTTTATA CCGCGATCTT TGAAGCTTTT
AATAAAGCAT GCCAGCGCCG TGCAGCAAGC AGAGTGAAAT AA
 
Protein sequence
MSEVGLAVVG VTACNMQLGL HPFNIVGEKY LLAIADATQS WPLVIPALGH CPAEVVLSRL 
DGILFTGSPS NIEPHHFDGP ASDEGTHHDP KRDATTLPLL KAAIDAGVPV LAICRGFQEM
NVVFGGSLHQ KLHELGGFIE HREDKTKSVE VQYGISHEVQ IEPGGLLHDA WGRSSAEVNS
VHTQGVDRLG VGLRPEAYAT DGLIEAFSVR NAKNFALGVQ WHPEWKALDS PFYTAIFEAF
NKACQRRAAS RVK