| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0891 |
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| Symbol | |
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| ID | 5661290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1087484 |
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| End bp | 1089016 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235436 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001500753 |
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| Protein GI | 157960719 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.891594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT CGAACGATGC TTACGCAGAT AACGACCTAA GGGAAGTTAA ACAGCTGGGG
ATGTGGGCCT CTATCGCCAG CTTAAGTTAT ATATTCTGGA TTGTCGGTGG CATGGAGCTG
GTTGAGCGCA TTGCCTACTA CGGTGTGAAA GCCAGTGCCG GCCTCTATGC AAAAGCCCCA
ACATCTGAAG GTGGTTTAGG AATTAGCCTT AGCGATTACG GTATCATCAT CGCTCTCTGG
GCATTCATGC AGACCTTTAT CCCTGTCTTT ACCGGCGGGA TCTCCGACCG TGTTGGGTAT
AAAGAAACCA TCTTCGTCTC CACCATAATC AAGATTGCCG GCTATCTAGT GATGGCTTTC
TTCCCTAGCT TTTACGGCTT CCTGTTCGGC GCCATACTGC TTGCAGGTGG TACCGGGGTA
TTTAAACCGG GGATCCAAGG CACCTTAGTC CTCTCCACAG GCAGACAAAA CACCTCGATG
GCATGGGGCA TATTCTACCA AGTGGTCAAT ATTGGTGGTT TCCTAGGTCC GCTCGTGGCC
GTGCATATGC GTCAGCTTTC TTGGGATAAT GTCTTCTATG CTTGTGCGGC GATTATTTCG
CTTAACTTCC TATTTTTGCT TGCCTATAAA GAGCCTGGTA AAGAAGAGCG TATGGAGCGC
AACCGTAAGA TTAAGGCTGG AGAGATCCAC CAAGAAGCAT TGTGGCGTGA TGCGTTAAAC
GAGCTGAAAA AGCCAGTTGT TATCTACTAC ATGCTAGTTT TTGCCGGATT CTGGTTCCTG
TTTAACTCGT TATTTGACGT ATTACCTATT CATATTGCCG AGTGGGTCGA TACCAGCGTG
ATTGTTACCT CGTTATTTGG TCCTGAGGGT ACCTCAAATG GTATGTTCCA GTTCTGGCTA
GGCCTCGATA ATACCGGAAC CAAGGTCATG CCTGAAGGCA TGCTTAACCT TAACGCTGGT
ATGATCATGA CGAGCTGCTT CTTGGTGGCC GCATTAACTG CAAAGTACCG TATTACTACG
GCTATGCTAG GTGGTTGCTT ACTTAGTATT TTCGCTTTCG TATTAATTGG CGCAACAAAT
ACCGCATGGA TGATGGTGTT AGCGATTGCC ATGTTCTCTT TCGGCGAGAT GATGATCAGC
CCAAAGAAAA ACGAGTTTAT GGGTAACATT GCTCCAGAAG GTAAGAAGGC AATGTACTTA
GGCTTCGTGA TGTTGCCACA GGGGATAGGC TGGACACTCG AAGGTTACTT CGGCCCTAAA
TTGTATGAGA TGTACGCCTC TAAAGAGATT TTTTCTCTTG AGCTATTAGC CCAGCGAGGC
ATGAGCTCAA CTGAGATCAG TGCCATTCCA CAAGGCGAAG CTTTTACCAC CCTAGTCGCT
TATACCGGTG AACCAGCTCA AGAGCTAACG ACCTTACTGT ACAATAGCCA TAACATCGGC
ATGGCTTGGT ACATCATTGC GGCTATCGGC ACCATATCGG CCGTAGGTAT TTATCTATAC
GGCAAGTGGT TATTTAAGCT ACAACAGCGC TAA
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| Protein sequence | MSDSNDAYAD NDLREVKQLG MWASIASLSY IFWIVGGMEL VERIAYYGVK ASAGLYAKAP
TSEGGLGISL SDYGIIIALW AFMQTFIPVF TGGISDRVGY KETIFVSTII KIAGYLVMAF
FPSFYGFLFG AILLAGGTGV FKPGIQGTLV LSTGRQNTSM AWGIFYQVVN IGGFLGPLVA
VHMRQLSWDN VFYACAAIIS LNFLFLLAYK EPGKEERMER NRKIKAGEIH QEALWRDALN
ELKKPVVIYY MLVFAGFWFL FNSLFDVLPI HIAEWVDTSV IVTSLFGPEG TSNGMFQFWL
GLDNTGTKVM PEGMLNLNAG MIMTSCFLVA ALTAKYRITT AMLGGCLLSI FAFVLIGATN
TAWMMVLAIA MFSFGEMMIS PKKNEFMGNI APEGKKAMYL GFVMLPQGIG WTLEGYFGPK
LYEMYASKEI FSLELLAQRG MSSTEISAIP QGEAFTTLVA YTGEPAQELT TLLYNSHNIG
MAWYIIAAIG TISAVGIYLY GKWLFKLQQR
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